| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0950 |
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| Symbol | |
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| ID | 3681170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1145225 |
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| End bp | 1147555 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716284 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_321469 |
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| Protein GI | 75907173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCACCTA GTAATCGTTA CGAGCAAGAG GAAACCACAA ACGAGAACTT ACCGCCAACG
CAGGTGGTAA GACAAAGAAA ATTATTAAAC CAGATAAGTG GTATAACATC TGGGATTGTT
ACTAGGTTTA CAAGCCGTGA ACGCCCAATT TATCGCCGTG TATGGTTTTG GGCGGGCTTA
AGTGTAGGCG GTGGCATCAT TGCCTTCAAC TACTTATTAG GGGAAATTGA TAAAACTTTA
CCTGATAAAG CGGAATTGCA AGCTGTCGTC CGTGAGCAAA CAATTACCAT CAAAGCTGTT
GATGGCACTA TATTACAACA GCAAGGCGAA GCAACCAGAG AAAAAGTCAA TCTGGAGAAG
ATGCCTGAGA TCCTCAAAAA AGCTTTTATT GCCTCCGAAG ACAGCAGATT CAGTCAGCAC
CAAGGTATTG ACCCCCAAGG GATTGTCAGA GCAGCCGTCA ATAATTTGCG ATCGCAAAAT
GTGGTAGAAG GTGGTAGCAC GATTACTCAA CAGTTATCAC GGATTCTTTT CCTCAAACAA
GAGCGTACAG TTTGGCGCAA ACTCAAGGAA GTACGCCTTG CCCAAAAGCT AGAACAAGAA
TTAACCAAAG ACCAGATTTT AGAGCGTTAT TTAAATTTGG TATATTTAGG TGCAGGGGCT
TACGGTGTAG CAGATGCAGC CTGGGTTTAC TTTAGTAAAC CAGTAGACCA ACTTACCCTC
CCGGAAGCGG CAACAATCGC GGGAATGCCC CCTGCACCGA GCTTATTTTC ACCAGACAAA
AACCCAGAAG CAGCCAAACA ACGACGAAAT TTGGTATTGC AACGGATGGA AAAAGAGGGC
TTTATTACAC CAGCCCAAAG GCAAGAAGCC ACTCAAGCAG CAATTACCCT CAAACCTAGT
TTACCCAAGC GGTTACAAGT AGAATCCCCC TACTTCACCA GCTATATTCA GCAAGAATTA
CCCAAGTATG TTTCCCCCCA AGTGTTAGCA AATGGGGGTT TAACTGTGGA AACTAGCTTA
AACCCAACTT GGCAGCAAGC CGCAGAAGCA GCCGTTGCTA AAACTTTACG CAATCAAGGA
CGATGGCAAA ACTTCAAACA AGCAGCTTTA GTCGCCATTG ACCCCCGTAA TGGGGAAATT
AAGGCAATGG TTGGGGGTCA GGACTTTGGT AAAAACCAAT TTAACCGTGT TACCCAAGCA
CAACGTCAGC CAGGTTCTAC ATTTAAAGGT TTTGTCTATG CGACTGCGAT CGCCACTGGC
AAAAACCCCT ACGATACTTA TGTAGATGCT CCCTTGGTAG TCGATGGTTA CGAACCGAAA
AACTACGGGG AAACCTTCCG AGGCACAATG AATATGCGCG ATGCCCTCAC CCGTTCGGTG
AATGTGGTAG CGTTGAAAGT CATGCTAGAT GTAGGATTTG AGCCAACAAT TCAACTAGCC
AAGAACATGG GGATTAAATC AAAACTCAAT CCTCATTATT CTCTAGCCCT TGGTTCTAAT
GAAGTCAATC TCTTAGAGTT AACCAGTGCT TACGGCAGTT TTGCCACCCA AGGTTTACAC
TCGGAACCTC ATGGCATCCG TCGTATCCTC AACCGCAAAG GCGAGGTCAT CTGGTCAGCA
AAATTTGACT CGAAGCGAGT GCTTGATCCT ACTAGTGCCG CTATTATGAC CTGGATGTTG
CGTAACGTGG TCGAAGCAGG CACAGGTGCA GCCGCCCAAC TGCCTAATAG ACCCGTTGCT
GGTAAGACAG GCACATCTGA TGAAGCCCGC GATTTATGGT TTATTGGCTA TATTCCCCAA
GTAGTTACAG GGGTTTGGTT AGGTAACGAT AATAATCGTC CTACTTATGG TAGTAGTGGC
AGTGCTGCTT ACACTTGGCA TGAATTTATG GAAAAAGCTG TAGAGGGAAT GCCAATAGCA
AAATTTCCCG AAAGACCAAA ACTGGAAGGT CGCAAAGGCA GTATTAAAGC AAAACCCATC
AAAGCCAAAC AAATTCTCAA TCGTCCTCTG ACACCTAATG AAGAATCAGT GCAAGAGACT
GGTTCATCAA CCAGACGCAG AAGACGCTCC CAACGATTAG AAGAAACCAC TCCCACTGAT
TCACCTAGAA GACGTAGACG ATATCGTAGC CAAGAATCAG TTTCTAGTGG TAGTGAAGAA
TCACCCCGTA GAAGACGGCG CAGAGCAGTT GTAGAATCAG ATACTTCAGA ACCAACCCGC
AGGTCTCGAC GGTCTTCATC CACAGTAGAT AATAGTTCTG GCTCAGCAAG TTCTGCACCA
ACACCTTCCT GGCGGGAAAG ACTTAGACCT AAGTCATCTT CTTCTAACTA A
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| Protein sequence | MPPSNRYEQE ETTNENLPPT QVVRQRKLLN QISGITSGIV TRFTSRERPI YRRVWFWAGL
SVGGGIIAFN YLLGEIDKTL PDKAELQAVV REQTITIKAV DGTILQQQGE ATREKVNLEK
MPEILKKAFI ASEDSRFSQH QGIDPQGIVR AAVNNLRSQN VVEGGSTITQ QLSRILFLKQ
ERTVWRKLKE VRLAQKLEQE LTKDQILERY LNLVYLGAGA YGVADAAWVY FSKPVDQLTL
PEAATIAGMP PAPSLFSPDK NPEAAKQRRN LVLQRMEKEG FITPAQRQEA TQAAITLKPS
LPKRLQVESP YFTSYIQQEL PKYVSPQVLA NGGLTVETSL NPTWQQAAEA AVAKTLRNQG
RWQNFKQAAL VAIDPRNGEI KAMVGGQDFG KNQFNRVTQA QRQPGSTFKG FVYATAIATG
KNPYDTYVDA PLVVDGYEPK NYGETFRGTM NMRDALTRSV NVVALKVMLD VGFEPTIQLA
KNMGIKSKLN PHYSLALGSN EVNLLELTSA YGSFATQGLH SEPHGIRRIL NRKGEVIWSA
KFDSKRVLDP TSAAIMTWML RNVVEAGTGA AAQLPNRPVA GKTGTSDEAR DLWFIGYIPQ
VVTGVWLGND NNRPTYGSSG SAAYTWHEFM EKAVEGMPIA KFPERPKLEG RKGSIKAKPI
KAKQILNRPL TPNEESVQET GSSTRRRRRS QRLEETTPTD SPRRRRRYRS QESVSSGSEE
SPRRRRRRAV VESDTSEPTR RSRRSSSTVD NSSGSASSAP TPSWRERLRP KSSSSN
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