Gene Ava_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0770 
Symbol 
ID3680357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp943849 
End bp944259 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content44% 
IMG OID637716099 
Producthypothetical protein 
Protein accessionYP_321289 
Protein GI75906993 
COG category[R] General function prediction only 
COG ID[COG2402] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.468965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.046742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGT GTGATGCAGG AGTTTTATTG TGTTTAGTTG ACCGCACTCA GCCTCAGCAT 
AATGCTTGTA AAATCGCAGT GATACGTTTG GCAAAGCCGC TCATCACAAC TTGGTCATGC
CTTACAGAAG CTATGTATCT TGCCCTGCAT CGTGGTGGAT GGCAAATGCA AAAACAGTTA
GGGCAACTTC TTTTAGATAA ACTGCTGACG GTTTACGAAA TTCAGGAGAG TGATTACAGC
CGCTTATTGG CACTGATGGA GCAATATCGC GATCGCCCAA TGGACTTAGC AGATGCAACG
TTGGTTTTGA CGGCTGAAAA GACAGGGAAT CGTCAAATTC TTACCCTTGA CTCTGATTTC
TTGTTTTATC GAATTGGTCA TCAAGACACC TTTGAAATCA TTTCACTCTG A
 
Protein sequence
MTLCDAGVLL CLVDRTQPQH NACKIAVIRL AKPLITTWSC LTEAMYLALH RGGWQMQKQL 
GQLLLDKLLT VYEIQESDYS RLLALMEQYR DRPMDLADAT LVLTAEKTGN RQILTLDSDF
LFYRIGHQDT FEIISL