Gene Ava_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0714 
Symbol 
ID3678860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp886328 
End bp886723 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content49% 
IMG OID637716042 
Product30S ribosomal protein S11 
Protein accessionYP_321233 
Protein GI75906937 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000403198 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAC AACCAACGAA AAAATCCGGG AGTAAGAAGC AGAAACGGAA CGTTCCCAAC 
GGAATGGCTT ATATCCAATC TACCTTCAAC AATAGCATTG TCACCATCAC CGATCAAAAT
GGAGATGTGA TTTCTTGGGC TAGTGCGGGT TCTAGCGGTT TTAAAGGTGC TAAAAAAGGA
ACCCCCTTTG CAGCGCAAAC CGCAGCAGAA AGTGCAGCCA GACGAGCTAT CGACCAAGGA
ATGCGCCAAA TTGAAGTGAT GGTTAGTGGA CCAGGAGCAG GTAGAGAAAC TGCAATTCGG
GCGCTTCAAG GAGCAGGGCT AGAAATTACC CTGATTCGAG ACATAACCCC CATTCCTCAT
AATGGTTGCC GTCCGCCAAA GCGCCGTCGC GTGTAG
 
Protein sequence
MARQPTKKSG SKKQKRNVPN GMAYIQSTFN NSIVTITDQN GDVISWASAG SSGFKGAKKG 
TPFAAQTAAE SAARRAIDQG MRQIEVMVSG PGAGRETAIR ALQGAGLEIT LIRDITPIPH
NGCRPPKRRR V