| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0709 |
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| Symbol | secY |
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| ID | 3678855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 883266 |
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| End bp | 884579 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716037 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_321228 |
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| Protein GI | 75906932 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000243192 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAGTC GAGATAAAGC CCCAACGGCT CAAGAAACTT TTATGCAGAT GGCACAAGCA
GCTGGGCTGA GAGGCAGGCT GCTTGTAACT GTCGGTATTT TAATCCTGGT TCGCCTGGGT
ATATTTTTAC CAGTACCAGG AATTGATAGA ACTCGTTTTG CCGAAGCAAT TTCGAGCAAT
AATGCCATAT TCGGTTTATT GGATATATTT TCAGGGCGAG GACTTTCAAC TTTGGGAGTC
TTTGCTTTAG GGATTTTGCC TTTTATTAAT GCGTCAATTA TCATCCAATT ACTGACTGCG
GCAATACCAT CTTTAGAAAA TTTACAGAAA AATGAGGGCG AAGCGGGTCG GCGGAAAATT
TCCCAAATCA CTCGCTACGT AACTGTAGGC TGGGCAATTT TTCAGAGTCT AGCTTTCTCT
GCTCTATTTC TCCAGCAGTT TGCTTTGCAA CCAGGCCCAG TATTTGTAGC AGAAACAGCG
ATCGCATTGA CTGCTGGTTC TATGTTCGTT ATGTGGGCAT CGGAACTGAT CACAGAACGT
GGTATTGGTA ACGGAGCATC TTTGTTGATT TTTGTCAACA TTGTCGCATC ATTACCAAAA
TCCTTAGGTG ACACCATTGA CTTAGTGCAA GTTGGTGGAC GAGAAATTGT TGGTCGCGTG
ATTGTGCTAG TGTTAGTATT CCTGGCAACA ATCGTGGGCA TTGTATTTGT ACAAGAAGGC
ATCCGGCGCA TCCCGATCAT CTCGGCTCGT CGTCAAGTTG GTCGTCGGGT ACTAGCAGAA
CAGCGTAGCT ATTTACCCTT ACGTCTCATC TCTGGTGGTG TTATGCCAAT CATTTTTGCA
GCAGCCATCT TGAGCTTGCC ACTTTTGATT GCTAATTTCA CCAAGAATCC AGAATTGGCT
AACATTGTCA ATACTTATTT GAGTCCAGGG GGTTCTGGAT CTTGGGTATA CGCTCTGGTG
TACTTAATTT CCATTGTTTT CTTTAGCTAC TTCTATTCTT CTTTGATTGT TAACCCTGTT
GACGTAGCTC AGAACCTCAA GAAAATGGGT TCTAGTATTC CGGGTATTCG TCCTGGAAAG
GCAACTAGTG AATACATCGA ACGGGTAATT AACAGACTAA CTTTTTTGGG CGCAATCTTT
TTGGGTTTAG TGGCAATTAT TCCTACCGCC GTAGAAAGAG CCTTAGGAGT ACCGACCTTT
AGAGGATTGG GTGCGACTTC ATTGCTAATT CTGGTTGGTG TAGCAATTGA GACAGCTAAA
CAAGTGCAAA CTTACGTTAT TTCTCAGCGT TATGAAGGAA TGGTGAAACA ATAG
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| Protein sequence | MISRDKAPTA QETFMQMAQA AGLRGRLLVT VGILILVRLG IFLPVPGIDR TRFAEAISSN
NAIFGLLDIF SGRGLSTLGV FALGILPFIN ASIIIQLLTA AIPSLENLQK NEGEAGRRKI
SQITRYVTVG WAIFQSLAFS ALFLQQFALQ PGPVFVAETA IALTAGSMFV MWASELITER
GIGNGASLLI FVNIVASLPK SLGDTIDLVQ VGGREIVGRV IVLVLVFLAT IVGIVFVQEG
IRRIPIISAR RQVGRRVLAE QRSYLPLRLI SGGVMPIIFA AAILSLPLLI ANFTKNPELA
NIVNTYLSPG GSGSWVYALV YLISIVFFSY FYSSLIVNPV DVAQNLKKMG SSIPGIRPGK
ATSEYIERVI NRLTFLGAIF LGLVAIIPTA VERALGVPTF RGLGATSLLI LVGVAIETAK
QVQTYVISQR YEGMVKQ
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