| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0697 |
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| Symbol | rpsC |
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| ID | 3678843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 877435 |
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| End bp | 878217 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637716025 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_321216 |
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| Protein GI | 75906920 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00415861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGACAAA AAATTCATCC AGTTGGCTTT CGCCTGGGAA TTACCCAAGA ACACCAATCG
CGTTGGTTTG CCGAACCTAG CCGCTATCCA GAACTTCTAC AAGAAGACCA CAAACTACGT
CAATATATAG AACAAAAACT GGGTAGACTC GCACAAAATA ACGCAGGTAT TTCCGAAGTA
CGGATTGAAC GGAAAGCCGA TCAAATTGAT CTAGAAGTGC GTACAGCTCG CCCAGGCGTA
GTTGTAGGTC GTGGTGGGCA AGGTATTGAA GCATTGCGTA CTGGACTACA AACACTTTTG
GGTGGTAATC GCCAAATTCG CATCAACGTA GTAGAAGTAC AACGAGTTGA TGCTGATGCT
TACCTGATTG CCGAATTTAT TGCTCAACAG TTGGAACGTC GTGTTTCCTT CCGTCGGGTA
GTGCGTCAAG CAATTCAACG CGCTCAAAAA GCTGGCATTC AAGGCATCAA AGTTCAAGTT
AGCGGTCGCC TCAACGGTGC AGAAATCGCC CGGACAGAGT GGACACGGGA AGGTAGAGTA
CCTCTACACA CCTTAAGAGC TGATATTGAC TACTCTTACT GCACAGCCAA AACCGTTTAC
GGTATTCTTG GCATCAAAGT TTGGGTATTC AAAGGCGAAA TCATCCCCGG ACAAGAAGTA
GCGGCACCAC CGCCTTCAAC CCGTGACCGC GACCGTGACC GTGGCGATCG CGATCGTGAA
CCCCGCCGTC GTCAACAACA ACGCCGCCGC CAGCAGTTTG AAGACCGCTC CAACGAAGGA
TAG
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| Protein sequence | MGQKIHPVGF RLGITQEHQS RWFAEPSRYP ELLQEDHKLR QYIEQKLGRL AQNNAGISEV
RIERKADQID LEVRTARPGV VVGRGGQGIE ALRTGLQTLL GGNRQIRINV VEVQRVDADA
YLIAEFIAQQ LERRVSFRRV VRQAIQRAQK AGIQGIKVQV SGRLNGAEIA RTEWTREGRV
PLHTLRADID YSYCTAKTVY GILGIKVWVF KGEIIPGQEV AAPPPSTRDR DRDRGDRDRE
PRRRQQQRRR QQFEDRSNEG
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