Gene Ava_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0687 
Symbol 
ID3678833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp870628 
End bp871455 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content43% 
IMG OID637716015 
Producthypothetical protein 
Protein accessionYP_321206 
Protein GI75906910 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.113774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCTC AAAAATCCTT AATCTGGGGC AAAAAGTTTA AAACCTCACA ACTGCAAATC 
CTGTTAGCTG ATAGTCTGAC TATCTTTTGG GGAGATTGGT TAGATTTACG GGTACGCGTA
GCCCAAGTAG CTGCATCTGG ATTAATCTCA CCACTAATAT ATATTTTGGC TTTTGGTTTA
GGGCTGGGTA GCTCAATTAG GCCAGGTTCC GCCATCAGTG GCAATTACAA TAACTATTTA
GAATTCATCT TGCCCGGTAT GGTAGCCCTA TCTTCCATGA CCATCAGCTT TGGTGGCACA
ACATTCTCAA TTTGTGGAGA TAGATTATTT ACCAAAACCT TTGAAGAACT ATTACTCACG
CCCATACATC CCTTAGCACT GCAACTGGGT AAAATGCTGG CTGGAGTTGT GCGAGGTTTA
ATGACTTCCG GTTCAGTGAT ATTGGTAGCC CTAATCATCA CTAGGAATTG GAATTTTCTT
CATCCCCTGT TTTTGCTGTT GTTGATATTA AATTGTGCAG TATTTGCAGG TTTGGGTGTA
ATTGTGGGAT TATCAGTGCG ATCGCTCGAA TCGGTAGGAC TGTACAACAA CTTCGTCATT
ATCCCTATGT CCTTTTTGGG TGCAACCTTC TTCGACCCCA GTACCTTACC AACAGCATTC
CAAGTCGTCG TTTATTTATT CCCTTTAACT TATGCCAGTA CGGGGCTACG CGCAGCCGCC
AACTTGCCCT TATCTCAATT CCCTTGGTAT AGCATACCTG TCTTACTAGT CATAGCGATC
GCTCTTTCTC TTTGGGGTGC TTCTAAATTT GCCCACCAAC AAGACTAA
 
Protein sequence
MASQKSLIWG KKFKTSQLQI LLADSLTIFW GDWLDLRVRV AQVAASGLIS PLIYILAFGL 
GLGSSIRPGS AISGNYNNYL EFILPGMVAL SSMTISFGGT TFSICGDRLF TKTFEELLLT
PIHPLALQLG KMLAGVVRGL MTSGSVILVA LIITRNWNFL HPLFLLLLIL NCAVFAGLGV
IVGLSVRSLE SVGLYNNFVI IPMSFLGATF FDPSTLPTAF QVVVYLFPLT YASTGLRAAA
NLPLSQFPWY SIPVLLVIAI ALSLWGASKF AHQQD