Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0687 |
Symbol | |
ID | 3678833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 870628 |
End bp | 871455 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637716015 |
Product | hypothetical protein |
Protein accession | YP_321206 |
Protein GI | 75906910 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.113774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATCTC AAAAATCCTT AATCTGGGGC AAAAAGTTTA AAACCTCACA ACTGCAAATC CTGTTAGCTG ATAGTCTGAC TATCTTTTGG GGAGATTGGT TAGATTTACG GGTACGCGTA GCCCAAGTAG CTGCATCTGG ATTAATCTCA CCACTAATAT ATATTTTGGC TTTTGGTTTA GGGCTGGGTA GCTCAATTAG GCCAGGTTCC GCCATCAGTG GCAATTACAA TAACTATTTA GAATTCATCT TGCCCGGTAT GGTAGCCCTA TCTTCCATGA CCATCAGCTT TGGTGGCACA ACATTCTCAA TTTGTGGAGA TAGATTATTT ACCAAAACCT TTGAAGAACT ATTACTCACG CCCATACATC CCTTAGCACT GCAACTGGGT AAAATGCTGG CTGGAGTTGT GCGAGGTTTA ATGACTTCCG GTTCAGTGAT ATTGGTAGCC CTAATCATCA CTAGGAATTG GAATTTTCTT CATCCCCTGT TTTTGCTGTT GTTGATATTA AATTGTGCAG TATTTGCAGG TTTGGGTGTA ATTGTGGGAT TATCAGTGCG ATCGCTCGAA TCGGTAGGAC TGTACAACAA CTTCGTCATT ATCCCTATGT CCTTTTTGGG TGCAACCTTC TTCGACCCCA GTACCTTACC AACAGCATTC CAAGTCGTCG TTTATTTATT CCCTTTAACT TATGCCAGTA CGGGGCTACG CGCAGCCGCC AACTTGCCCT TATCTCAATT CCCTTGGTAT AGCATACCTG TCTTACTAGT CATAGCGATC GCTCTTTCTC TTTGGGGTGC TTCTAAATTT GCCCACCAAC AAGACTAA
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Protein sequence | MASQKSLIWG KKFKTSQLQI LLADSLTIFW GDWLDLRVRV AQVAASGLIS PLIYILAFGL GLGSSIRPGS AISGNYNNYL EFILPGMVAL SSMTISFGGT TFSICGDRLF TKTFEELLLT PIHPLALQLG KMLAGVVRGL MTSGSVILVA LIITRNWNFL HPLFLLLLIL NCAVFAGLGV IVGLSVRSLE SVGLYNNFVI IPMSFLGATF FDPSTLPTAF QVVVYLFPLT YASTGLRAAA NLPLSQFPWY SIPVLLVIAI ALSLWGASKF AHQQD
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