Gene Ava_0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0668 
Symbol 
ID3678639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp849761 
End bp850669 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content35% 
IMG OID637715996 
Product3'-5' exonuclease 
Protein accessionYP_321187 
Protein GI75906891 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.562548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0558608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATACT TAACTGATGC CAGGGAAATT CGTGCCATAG TTGCTGGATA TACTCAAGCT 
ACTACTTTAT GGATAGACAC TGAGGTCGCT GACTATAAAA GTCGTAATCC TCGATTATCG
CTGATTCAGG TATTAGATGA TCCTGACGAT ATGAGTGGCG ATCGCGTTTA CCTTTTGGAT
GTACTTGATC AACCTGATTT AGTCGCTAAT TTTGTTGAGA AAATTATGGT AAGCACCAAT
ATTGAAAAGG TGTTTCACAA TGCTAGTTTT GATGTTAAAC TCCTGGGCAA TAAACAAGCT
AAAAATATTA CTTGCACTTT AGAAATTGCT AAGAAAATAC CTTATCATCT CTTGCCAGTA
CAAAATTATC AACTGCAAAG TTTAGCTACA TTATTATGTA ATTTTAACAA TATTGATAAA
CAAGAACAGA GTAGTAATTG GGGACGGCGA CCTCTCAGCG AAGAACAAAT AGAATATGCT
TATCTAGATT GTATTTATCT CGCTCAAATT CATCGGCGTT TATTAGACTT GCAAATAGAA
AGTAACCCTG ATCCAGCGAC AGTAGACATA ACAGCTATCA ACTCACGCTT TTCCCAAATC
GAGGAGCAGT GGAAATTGTT AAATTCTGAA TATGAGCATC TACAAGAGCA ATTAAAAAAA
GCTATGCAGG CTCAAAATAT ATCAGAAACC TCTACTTATA AGCTCACAAG TCATCAACGC
AAAGTTGTAA AAGTACAGTT TTCTGAATTG TCTAATCTAG TACAAAACCA AGATATTAGT
TTAGATTTCC CAGTTACATT AACTCAGAAG CTACAAAAAG ATTTAGGAGA AAATCTCGAA
CAACTATCTG TAGACATAGA GGAAAACACT TATTTACGGC TAACCCTGAA AAATCAGGAT
GATTCGTAA
 
Protein sequence
MPYLTDAREI RAIVAGYTQA TTLWIDTEVA DYKSRNPRLS LIQVLDDPDD MSGDRVYLLD 
VLDQPDLVAN FVEKIMVSTN IEKVFHNASF DVKLLGNKQA KNITCTLEIA KKIPYHLLPV
QNYQLQSLAT LLCNFNNIDK QEQSSNWGRR PLSEEQIEYA YLDCIYLAQI HRRLLDLQIE
SNPDPATVDI TAINSRFSQI EEQWKLLNSE YEHLQEQLKK AMQAQNISET STYKLTSHQR
KVVKVQFSEL SNLVQNQDIS LDFPVTLTQK LQKDLGENLE QLSVDIEENT YLRLTLKNQD
DS