Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0668 |
Symbol | |
ID | 3678639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 849761 |
End bp | 850669 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637715996 |
Product | 3'-5' exonuclease |
Protein accession | YP_321187 |
Protein GI | 75906891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.562548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0558608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATACT TAACTGATGC CAGGGAAATT CGTGCCATAG TTGCTGGATA TACTCAAGCT ACTACTTTAT GGATAGACAC TGAGGTCGCT GACTATAAAA GTCGTAATCC TCGATTATCG CTGATTCAGG TATTAGATGA TCCTGACGAT ATGAGTGGCG ATCGCGTTTA CCTTTTGGAT GTACTTGATC AACCTGATTT AGTCGCTAAT TTTGTTGAGA AAATTATGGT AAGCACCAAT ATTGAAAAGG TGTTTCACAA TGCTAGTTTT GATGTTAAAC TCCTGGGCAA TAAACAAGCT AAAAATATTA CTTGCACTTT AGAAATTGCT AAGAAAATAC CTTATCATCT CTTGCCAGTA CAAAATTATC AACTGCAAAG TTTAGCTACA TTATTATGTA ATTTTAACAA TATTGATAAA CAAGAACAGA GTAGTAATTG GGGACGGCGA CCTCTCAGCG AAGAACAAAT AGAATATGCT TATCTAGATT GTATTTATCT CGCTCAAATT CATCGGCGTT TATTAGACTT GCAAATAGAA AGTAACCCTG ATCCAGCGAC AGTAGACATA ACAGCTATCA ACTCACGCTT TTCCCAAATC GAGGAGCAGT GGAAATTGTT AAATTCTGAA TATGAGCATC TACAAGAGCA ATTAAAAAAA GCTATGCAGG CTCAAAATAT ATCAGAAACC TCTACTTATA AGCTCACAAG TCATCAACGC AAAGTTGTAA AAGTACAGTT TTCTGAATTG TCTAATCTAG TACAAAACCA AGATATTAGT TTAGATTTCC CAGTTACATT AACTCAGAAG CTACAAAAAG ATTTAGGAGA AAATCTCGAA CAACTATCTG TAGACATAGA GGAAAACACT TATTTACGGC TAACCCTGAA AAATCAGGAT GATTCGTAA
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Protein sequence | MPYLTDAREI RAIVAGYTQA TTLWIDTEVA DYKSRNPRLS LIQVLDDPDD MSGDRVYLLD VLDQPDLVAN FVEKIMVSTN IEKVFHNASF DVKLLGNKQA KNITCTLEIA KKIPYHLLPV QNYQLQSLAT LLCNFNNIDK QEQSSNWGRR PLSEEQIEYA YLDCIYLAQI HRRLLDLQIE SNPDPATVDI TAINSRFSQI EEQWKLLNSE YEHLQEQLKK AMQAQNISET STYKLTSHQR KVVKVQFSEL SNLVQNQDIS LDFPVTLTQK LQKDLGENLE QLSVDIEENT YLRLTLKNQD DS
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