Gene Ava_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0595 
Symbol 
ID3678625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp751105 
End bp752382 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content51% 
IMG OID637715923 
ProductSignal transduction histidine kinase (STHK), LytS 
Protein accessionYP_321114 
Protein GI75906818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTAG GTGTACATAG ACGTGCTGTA GGCGTATTTT CTCATCGCCG AGATGCTGAA 
CAAGCCCTCC ACGAATTGAA ACAATCCGGT TTTGCAATGG ATAGAATTTC CATCATCGCT
CAGGATGCAG ACCGGGATGA AGAGATTGCT GGTAGCCCCG TGCGAGAGAA AGTAGGCGAT
AAGTCTGACG AGGGTGCCAA AACAGGGGCT ATTACTGGCG GTGCTTTAGG CGGCTTGGGT
GGTTTATTAG TTGGTCTTGG CACTCTAGCA ATTCCAGGTA TTGGGCCTAT CATGTTAGCA
GGAGCAACTG CGACCACCTT GGCTACAACC CTTGCTGGTG CTGGACTTGG TGCCGTGGCT
GGTGGTCTAT TGGGTGGGTT AATTGGTTTA GGAATTCCAG AGGAACGAGC TAGAGGCTAT
GAAGACCGTG TACGCCGTGG TCACTATTTA GTCATAGTAG ACGGGACAGA TGCAGAAATC
GCCCAAGCAG AGGCAATCCT GCGTCGTCGC GGCATAGAAG ACTACGATAT CTATGATGCC
CCTGGAACCG CAGCAGCAGC CACTGGCGTT ACTCATCGAG ATGTGGTTCC CGCAACAACC
AGACAAAGAA GCAGAAGAGC GATCGGTGTA TTCCCTCACC GTCGAGATGC AGAAGCCGCA
TTAACAGAAT TGCGGGATGC AGGTTTCTCC ATGAATCAAG TTTCCCTCAT CGCCAAAGAT
AGCAGTGATA GCAAAACCAC TGGTGCGAAC CTCGGTCATG GTAATAAAGC CGACGAAGGA
GCCAAGGCTG GAGCCGCTAC AGGTGGAGGT TTAGGCGCTT TAGGCGGTCT ATTAGTAGGA
TTGGGTGCTT TGGCAATCCC CGGAGTTGGG CCAGTCATTG CAGGTGGTGC AGCTGCTACC
GCGATCGCCA CAACTTTAGC AGGTGGCGCT CTCGGTGCAG CCGCAGGTGG AATTGTTGGC
GGACTCGTGG GCTTGGGAAT CCCTGAAGAC AAAGCGCGAG TTTATAGCGA TCGCTTCCAA
AGAGGTGACT ACCTCATCAT TGTTGACGGT ACAGAGACCG AAATTCAACA CGCTGAGGCT
ATCCTCAAAC GTCGTGGTAT TCAAGAATAC TCAGTTTTTG ATGCCACCGA TTTACATGAT
ACACACCGCC GAGATGTTGA TAGCACAATC ACAGGCGATC GCACTTCCTC CACTGTAGGC
GATCGTATTT CCTCTACTGT AGGTCACGAC ACAGAACCAA GCGTAGTGAT TATTGATCAC
CGAGAAGAAA GAATCTAA
 
Protein sequence
MVVGVHRRAV GVFSHRRDAE QALHELKQSG FAMDRISIIA QDADRDEEIA GSPVREKVGD 
KSDEGAKTGA ITGGALGGLG GLLVGLGTLA IPGIGPIMLA GATATTLATT LAGAGLGAVA
GGLLGGLIGL GIPEERARGY EDRVRRGHYL VIVDGTDAEI AQAEAILRRR GIEDYDIYDA
PGTAAAATGV THRDVVPATT RQRSRRAIGV FPHRRDAEAA LTELRDAGFS MNQVSLIAKD
SSDSKTTGAN LGHGNKADEG AKAGAATGGG LGALGGLLVG LGALAIPGVG PVIAGGAAAT
AIATTLAGGA LGAAAGGIVG GLVGLGIPED KARVYSDRFQ RGDYLIIVDG TETEIQHAEA
ILKRRGIQEY SVFDATDLHD THRRDVDSTI TGDRTSSTVG DRISSTVGHD TEPSVVIIDH
REERI