Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0595 |
Symbol | |
ID | 3678625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 751105 |
End bp | 752382 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637715923 |
Product | Signal transduction histidine kinase (STHK), LytS |
Protein accession | YP_321114 |
Protein GI | 75906818 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTAGTAG GTGTACATAG ACGTGCTGTA GGCGTATTTT CTCATCGCCG AGATGCTGAA CAAGCCCTCC ACGAATTGAA ACAATCCGGT TTTGCAATGG ATAGAATTTC CATCATCGCT CAGGATGCAG ACCGGGATGA AGAGATTGCT GGTAGCCCCG TGCGAGAGAA AGTAGGCGAT AAGTCTGACG AGGGTGCCAA AACAGGGGCT ATTACTGGCG GTGCTTTAGG CGGCTTGGGT GGTTTATTAG TTGGTCTTGG CACTCTAGCA ATTCCAGGTA TTGGGCCTAT CATGTTAGCA GGAGCAACTG CGACCACCTT GGCTACAACC CTTGCTGGTG CTGGACTTGG TGCCGTGGCT GGTGGTCTAT TGGGTGGGTT AATTGGTTTA GGAATTCCAG AGGAACGAGC TAGAGGCTAT GAAGACCGTG TACGCCGTGG TCACTATTTA GTCATAGTAG ACGGGACAGA TGCAGAAATC GCCCAAGCAG AGGCAATCCT GCGTCGTCGC GGCATAGAAG ACTACGATAT CTATGATGCC CCTGGAACCG CAGCAGCAGC CACTGGCGTT ACTCATCGAG ATGTGGTTCC CGCAACAACC AGACAAAGAA GCAGAAGAGC GATCGGTGTA TTCCCTCACC GTCGAGATGC AGAAGCCGCA TTAACAGAAT TGCGGGATGC AGGTTTCTCC ATGAATCAAG TTTCCCTCAT CGCCAAAGAT AGCAGTGATA GCAAAACCAC TGGTGCGAAC CTCGGTCATG GTAATAAAGC CGACGAAGGA GCCAAGGCTG GAGCCGCTAC AGGTGGAGGT TTAGGCGCTT TAGGCGGTCT ATTAGTAGGA TTGGGTGCTT TGGCAATCCC CGGAGTTGGG CCAGTCATTG CAGGTGGTGC AGCTGCTACC GCGATCGCCA CAACTTTAGC AGGTGGCGCT CTCGGTGCAG CCGCAGGTGG AATTGTTGGC GGACTCGTGG GCTTGGGAAT CCCTGAAGAC AAAGCGCGAG TTTATAGCGA TCGCTTCCAA AGAGGTGACT ACCTCATCAT TGTTGACGGT ACAGAGACCG AAATTCAACA CGCTGAGGCT ATCCTCAAAC GTCGTGGTAT TCAAGAATAC TCAGTTTTTG ATGCCACCGA TTTACATGAT ACACACCGCC GAGATGTTGA TAGCACAATC ACAGGCGATC GCACTTCCTC CACTGTAGGC GATCGTATTT CCTCTACTGT AGGTCACGAC ACAGAACCAA GCGTAGTGAT TATTGATCAC CGAGAAGAAA GAATCTAA
|
Protein sequence | MVVGVHRRAV GVFSHRRDAE QALHELKQSG FAMDRISIIA QDADRDEEIA GSPVREKVGD KSDEGAKTGA ITGGALGGLG GLLVGLGTLA IPGIGPIMLA GATATTLATT LAGAGLGAVA GGLLGGLIGL GIPEERARGY EDRVRRGHYL VIVDGTDAEI AQAEAILRRR GIEDYDIYDA PGTAAAATGV THRDVVPATT RQRSRRAIGV FPHRRDAEAA LTELRDAGFS MNQVSLIAKD SSDSKTTGAN LGHGNKADEG AKAGAATGGG LGALGGLLVG LGALAIPGVG PVIAGGAAAT AIATTLAGGA LGAAAGGIVG GLVGLGIPED KARVYSDRFQ RGDYLIIVDG TETEIQHAEA ILKRRGIQEY SVFDATDLHD THRRDVDSTI TGDRTSSTVG DRISSTVGHD TEPSVVIIDH REERI
|
| |