Gene Ava_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0576 
Symbol 
ID3682270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp723457 
End bp724248 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content44% 
IMG OID637715904 
Productaminotransferase, class IV 
Protein accessionYP_321095 
Protein GI75906799 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00329112 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.259763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGGT ACAACGGTAA GCTAATTAAT TCCCAAACCT TGGAGTTAGA TATTTATGAT 
CCTGGGTTAC TTTATGGGGC AACTATTTTT ACCACACTGC GAATTTATGG GCATTCTCTC
GATCATAGTT TAACTAGTTG GCAGGCACAC TGCGATCGCC TCCACACTTC CATTCGATCT
TTCGCTTGGG AACAACCAGA CTGGAACCGT ATCCGCCAAG GTGCAGAAAT ACTGTTAACT
CATTTCCCCG TTCTCAGAAT CACTATTTTT CCTGATGGTA GGGAATGGAT AATTGGCAGG
TATTTACCCC AGAATTTATT AGAAATCCAA AAATATGGCG TATCTTGCAC CATTGCTGAA
CCAGAAATAT ATCGTAGTTT GCCTTCTCAT AAAACTGGTA ACTATCTGAG TGCGTGGATG
GCTAAAACTT ATGCGGCAAA GTTAAACTCC CAAGAAGCAA TTTTAGTGAA TACAGCCGGA
AATTGGCTAG AAACCACCAC AGGCAACCTT TGGGGATGGC AAAATGGGAG TTGGTGGACA
CCACCTTTAA CAGAGGGAAT TTTACCGGGG ATTGGACGAC AGCAGCTAAT CCACTGGCTG
CAAACTCATC AACAAACGGT GCGGGAGGAG CCTTGGACAT CTGAGCTAGT CAACGGTTTT
GAAGCGATCG CCTACACTAA TAGTGTGGTG GAAGTTATTC CCATACATAC CGTTTACCAG
CCCACAGAAT CGTTACAATA TGATCCCTAC CATCCACGCT TGCAAAAACT TAGGGAACTA
TTCTTAGCAT GA
 
Protein sequence
MFWYNGKLIN SQTLELDIYD PGLLYGATIF TTLRIYGHSL DHSLTSWQAH CDRLHTSIRS 
FAWEQPDWNR IRQGAEILLT HFPVLRITIF PDGREWIIGR YLPQNLLEIQ KYGVSCTIAE
PEIYRSLPSH KTGNYLSAWM AKTYAAKLNS QEAILVNTAG NWLETTTGNL WGWQNGSWWT
PPLTEGILPG IGRQQLIHWL QTHQQTVREE PWTSELVNGF EAIAYTNSVV EVIPIHTVYQ
PTESLQYDPY HPRLQKLREL FLA