Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0576 |
Symbol | |
ID | 3682270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 723457 |
End bp | 724248 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715904 |
Product | aminotransferase, class IV |
Protein accession | YP_321095 |
Protein GI | 75906799 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00329112 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.259763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTGGT ACAACGGTAA GCTAATTAAT TCCCAAACCT TGGAGTTAGA TATTTATGAT CCTGGGTTAC TTTATGGGGC AACTATTTTT ACCACACTGC GAATTTATGG GCATTCTCTC GATCATAGTT TAACTAGTTG GCAGGCACAC TGCGATCGCC TCCACACTTC CATTCGATCT TTCGCTTGGG AACAACCAGA CTGGAACCGT ATCCGCCAAG GTGCAGAAAT ACTGTTAACT CATTTCCCCG TTCTCAGAAT CACTATTTTT CCTGATGGTA GGGAATGGAT AATTGGCAGG TATTTACCCC AGAATTTATT AGAAATCCAA AAATATGGCG TATCTTGCAC CATTGCTGAA CCAGAAATAT ATCGTAGTTT GCCTTCTCAT AAAACTGGTA ACTATCTGAG TGCGTGGATG GCTAAAACTT ATGCGGCAAA GTTAAACTCC CAAGAAGCAA TTTTAGTGAA TACAGCCGGA AATTGGCTAG AAACCACCAC AGGCAACCTT TGGGGATGGC AAAATGGGAG TTGGTGGACA CCACCTTTAA CAGAGGGAAT TTTACCGGGG ATTGGACGAC AGCAGCTAAT CCACTGGCTG CAAACTCATC AACAAACGGT GCGGGAGGAG CCTTGGACAT CTGAGCTAGT CAACGGTTTT GAAGCGATCG CCTACACTAA TAGTGTGGTG GAAGTTATTC CCATACATAC CGTTTACCAG CCCACAGAAT CGTTACAATA TGATCCCTAC CATCCACGCT TGCAAAAACT TAGGGAACTA TTCTTAGCAT GA
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Protein sequence | MFWYNGKLIN SQTLELDIYD PGLLYGATIF TTLRIYGHSL DHSLTSWQAH CDRLHTSIRS FAWEQPDWNR IRQGAEILLT HFPVLRITIF PDGREWIIGR YLPQNLLEIQ KYGVSCTIAE PEIYRSLPSH KTGNYLSAWM AKTYAAKLNS QEAILVNTAG NWLETTTGNL WGWQNGSWWT PPLTEGILPG IGRQQLIHWL QTHQQTVREE PWTSELVNGF EAIAYTNSVV EVIPIHTVYQ PTESLQYDPY HPRLQKLREL FLA
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