Gene Ava_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0532 
Symbol 
ID3682362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp670115 
End bp671026 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content40% 
IMG OID637715860 
ProductK+ channel, inward rectifier 
Protein accessionYP_321051 
Protein GI75906755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC GACTGAAGAG ACTTGCAAAG AAACAACCAG ATAGAGTCCA AATTAAAGTT 
CAGAACGGAC AATTTGAGAT TATTGGCATG GGTGTATGGC ATTCTTACTG GCGAGATCCT
TATCATTTAC TGCTAACTAT TCCTTGGACT GGCTTTTTAT TACTAATTTG TATTTCTTAT
CTAGCAATTA ATCTCATATT CGCCCTAGCT TATTGGCTGG GAGGAGATTG TATAGCCAAT
GCTAAACCTG GTTCTTTTTT GGATTTATTT TTCTTCAGCG TGCAGACACT CGCATCCATT
GGCTATGGTG CAATGTATCC TAAAACACTA TATGCCAATA CTATTGTCAC CATTGAAGCC
ATGATTGGTT TGGTGGGAAT TGCTGTTATG ACAGGACTTG CATTTGCTCG TTTTTCTCGT
CCTTCCGCCC GTGTCATATT TAGCCGTGTT GCAGTCATCA CACCGTACAA TGGTGTACCA
ACGCTGATGT TTCGCACTGC TAACCAGCGA CGCAATTTAA TTTTAGAAGC CCAGATGCGA
GTTTACTTAA TGCGTGATGA AATCACAGCA GAAGGAGGAT TTATTCGGCG TTTCCACGAT
TTAAAACTAT TAAGAAATCA GACACCTAGT TTTACATTAA GCTGGCTAGC ACTGCATCCC
ATAGATGAGT TCAGCCCTTT ATATGGAATG TCAGCAGAGT CGCTAATGCA AACAAACACA
AATCTAGTGA TTTCAGTCAG TGGTATTGAT GAAACAGTAG CCCAAGTAGT TCATGCCCGT
CATACTTATA CGGCTAGTAA TATTTTATGG AACAGTCGCT TCGTTGATAT TTTTCACCAT
ACATCTGATG GACATCGCTA CATCGACTAT AAATATTTTC ACGATGTTCT ACCTTTAGAT
GAGACAGGCT AA
 
Protein sequence
MKFRLKRLAK KQPDRVQIKV QNGQFEIIGM GVWHSYWRDP YHLLLTIPWT GFLLLICISY 
LAINLIFALA YWLGGDCIAN AKPGSFLDLF FFSVQTLASI GYGAMYPKTL YANTIVTIEA
MIGLVGIAVM TGLAFARFSR PSARVIFSRV AVITPYNGVP TLMFRTANQR RNLILEAQMR
VYLMRDEITA EGGFIRRFHD LKLLRNQTPS FTLSWLALHP IDEFSPLYGM SAESLMQTNT
NLVISVSGID ETVAQVVHAR HTYTASNILW NSRFVDIFHH TSDGHRYIDY KYFHDVLPLD
ETG