Gene Ava_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0500 
Symbol 
ID3682407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp623661 
End bp624110 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content38% 
IMG OID637715827 
Producttransport-associated protein 
Protein accessionYP_321019 
Protein GI75906723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.403996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TGTTTTCCCT ATTAGTGACC GGCTTTCTAT TAGTTGGTAA TTTTGGCTGC 
CAAGAAGCTC CCACCAACAC CAGTGGAGCT AATCAAGTAC CTGCAAAACA GGCATCTGAA
ATGACGAAAA CCACAGGTAA AACTATCAAA TCTACTGTCA AAGAAACCCC AATTCCCGTA
GTTAATAGCA ATACCAAAGA TAAAACGGTA ACAAATAAAA ACGTAGATAC AAAAACTGAA
GGAGATATAA AAGCCTTAGT TACCAATAAA TTACAGGCAG GTATCCCAGG TAATAAGCTT
GTAGTAGAAA ATAAACAAGG TGAAATTACC ATCAAAGGTA TAGCAAGTTC CCAGCAAGAA
CTAGAAAAAG CCGAAAAGTT AGTCAAAGAA GTCAAAGGCG TGAAGACTGT AAAAGTAGAA
GCTAAAGTTG AGCCTAGCAA CAGGTCTTAG
 
Protein sequence
MKKVFSLLVT GFLLVGNFGC QEAPTNTSGA NQVPAKQASE MTKTTGKTIK STVKETPIPV 
VNSNTKDKTV TNKNVDTKTE GDIKALVTNK LQAGIPGNKL VVENKQGEIT IKGIASSQQE
LEKAEKLVKE VKGVKTVKVE AKVEPSNRS