| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0470 |
|---|
| Symbol | |
|---|
| ID | 3682436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 594665 |
|---|
| End bp | 595444 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637715797 |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_320989 |
|---|
| Protein GI | 75906693 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.451824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.105084 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTAG ATAAAAGTAG AGTTATATTA GAAGCAAAGT CACTCACCCG CCGCTTTGGT
GGTTTAATAG CGGTAAATAA TGTATCTTTT ACTGTTAATC ACTATGAAAT TTTTGGTTTA
ATAGGCCCTA ATGGCGCAGG TAAAACTACA CTGTTTAATT TAATTACAGC TTTAATCCCA
CCTTCCAGTG GCGAGCTAAT ATATCAAAAT AAAGCAATTG CTCAACTAGG TCCTCATGAA
ATTGCTAGTT TGGGGATTGC GCGGACATTC CAAAATATTC GCTTATTTGG GGAATTATCG
GCACTAGAAA ACGTGATAAT TGCCCGTCAT TTACATACTA AAAGTACTAT ATTTACAGGT
GTTCTAGGAT TACCACCAGC ACCTAAAGAA GAAGCTCGCA GTAGAGAGAA AGCTTTAGAA
TTATTAGAGA TGGTGGGACT GAGCGATCGC GCCCAAGAAA AAGCCCGAAA TTTTGCTTAT
GGTGATCAAC GGCGCTTAGA AATTGCCCGC GCTTTAGCCT TAGAACCGCA AATATTACTA
CTCGATGAAC CTGCGGCAGG TATGAATCCC AGTGAGAAAC AGCAATTGAG TGAATTTATT
CGGGAAATAC GCGATCGCTT CAATTTAACT ATTATTTTGA TTGAGCATCA CGTACCTTTA
GTTATGGGCT TGTGTGACAG AATTGCTGTA TTAGATTTTG GGCAATTAAT TGCTTTAGGT
GAACCATCTG TAGTCAGGAA TGATCCGGCC GTAATTGAGG CTTATTTGGG CAATGAATAA
|
|---|
| Protein sequence | MSLDKSRVIL EAKSLTRRFG GLIAVNNVSF TVNHYEIFGL IGPNGAGKTT LFNLITALIP
PSSGELIYQN KAIAQLGPHE IASLGIARTF QNIRLFGELS ALENVIIARH LHTKSTIFTG
VLGLPPAPKE EARSREKALE LLEMVGLSDR AQEKARNFAY GDQRRLEIAR ALALEPQILL
LDEPAAGMNP SEKQQLSEFI REIRDRFNLT IILIEHHVPL VMGLCDRIAV LDFGQLIALG
EPSVVRNDPA VIEAYLGNE
|
|---|
| |