| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0419 |
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| Symbol | |
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| ID | 3682638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 538485 |
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| End bp | 539159 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637715748 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_320940 |
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| Protein GI | 75906644 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.338331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0276215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACAAAC ACATATCATT CGTGTTGAGT GTGTTGTTGT TGGGTGGTGG CACTGCGACT
ATCCCTACAA TAGCCCAAGG GCAGGTTTTG GTTGTGCAAG CTAACAATGC AGAGTTAAAA
AGACTGCTAG AGGATGGTAA GAGGTTAGTG GATGCTGGGG ACTATAATGG AGCGATCGCA
GTTTATCAAC AAGCTGCCAC AATGGAACCG AGAAATGCCA GAATTCATTC GGGAATTGGG
TATTTACACG CACAACAGGG AAATTTCCAG GCTGCATTAG CATCATACCG TCGAGCGATC
GCTATCAACC CGAATAATAG TGATTTTTTC TATGCAGTAG GTTACATCAA AGGCAACATG
GGCGATACAC CAGGTGCAAA AGAAGCTTAC CGCCGTGCTA TTCAATTAAA CCGCAACAAT
GTTAGCGCTT ATGTGGGTTT AGGTATCACT CAATCTCGGA TGGGAGATTT CCAATCAGCT
AATTGGGCAT TTGAGCAAGC AATTAAGCTT GATAAAAACA ACGCCCAGAC TTATGAGTTT
ATGGCAGCGA TGTATAAACA AAGACGGCAA ACTAAACAAG CAAGTAACCT ACTGCAAAAA
GCCCGCGACT TATACCAAAG GCGAAACGAT GCAGATGGTG TCGCTAGAGT AGAGGCGATG
TTGCAGCAGT TATAA
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| Protein sequence | MYKHISFVLS VLLLGGGTAT IPTIAQGQVL VVQANNAELK RLLEDGKRLV DAGDYNGAIA
VYQQAATMEP RNARIHSGIG YLHAQQGNFQ AALASYRRAI AINPNNSDFF YAVGYIKGNM
GDTPGAKEAY RRAIQLNRNN VSAYVGLGIT QSRMGDFQSA NWAFEQAIKL DKNNAQTYEF
MAAMYKQRRQ TKQASNLLQK ARDLYQRRND ADGVARVEAM LQQL
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