| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0387 |
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| Symbol | |
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| ID | 3682664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 501350 |
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| End bp | 502144 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637715715 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_320908 |
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| Protein GI | 75906612 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.374464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.89902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACCCT CACAAGAAGT AGATACAAGA ACCACTCCTG AGATTGATAC AGAAGGATAC
GGCAACTCAG ATATTGATTC TCTCGATGAG TTGCCTGGTG AAGTCGAAAT GTCTCTATTC
GACCACCTAG AAGAATTAAG ACAGCGCATC TTTTATTCAC TGATTGCCGT AGCAGTGGGT
GTAGTTGGCT GCTTCTTCGC CGTCAAGCCA ATTGTTCAAT TACTAGAAGT CCCAGCTCAA
GGCGTTAAAT TTCTCCAGCT AGCCCCCGGA GAATATTTCT TTGTTTCTCT CAAAGTTGCA
GGCTACACTG GCTTGTTACT TTCTAGTCCT TTCATTCTCT ACCAAATTAT TTTGTTTGTT
CTCCCTGGAT TAACTCGGCG CGAACGTGGT CTACTTGGGC CTATTGTTTT AGGGTCAAGT
GTGCTGTTTG CCGCCGGTTT AGTCTTTGCT TATTTACTTT TGATTCCCGC CGCTTTGAAT
TTTTTCATCA GTTACGGCGC GGATGTAGTC GAACAACTGT GGTCTATCGA CAAATATTTT
GAATTTGTAC TATTGCTTTT ATTTAGTACT GGGTTGGCTT TCCAAGTTCC CATCATCCAA
CTTTTACTAG CTAATTTAGG TATCGTTTCA TCCCAAAGAA TGATTTCTGG CTGGCGATTT
GTAATTATGG CAGCCGTAGT TTTAGGTGCT GTACTTACAC CTTCCACAGA CCCCCTAACT
CAAAGTCTTT TGGCAGGCGC AGTACTTACC CTTTACTTTG GTGGTATTGG TTTAGTGAAG
CTCACAGGTA AATGA
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| Protein sequence | MTPSQEVDTR TTPEIDTEGY GNSDIDSLDE LPGEVEMSLF DHLEELRQRI FYSLIAVAVG
VVGCFFAVKP IVQLLEVPAQ GVKFLQLAPG EYFFVSLKVA GYTGLLLSSP FILYQIILFV
LPGLTRRERG LLGPIVLGSS VLFAAGLVFA YLLLIPAALN FFISYGADVV EQLWSIDKYF
EFVLLLLFST GLAFQVPIIQ LLLANLGIVS SQRMISGWRF VIMAAVVLGA VLTPSTDPLT
QSLLAGAVLT LYFGGIGLVK LTGK
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