Gene Ava_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0340 
Symbol 
ID3682773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp437211 
End bp438278 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content38% 
IMG OID637715668 
Producthypothetical protein 
Protein accessionYP_320861 
Protein GI75906565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.586922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.321753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAT TCCGTCCGCT TCAACAAGTC AGTCTGATAT TTAATAATAC TTTTCAGCAA 
CACAGGGAAG ATATTTCGGC TATATTACTT ACTCAAGAAA AGCATTTATG GCTTGGGTCG
GATGAAACTG CCACTATTGA GCGTTTATAT TTGGTTGATG GAGATAAATT TAGTGATCAC
AAACAATTTC GAGTGGCTGA ATTTATTGAT TTACCAGCAC CAGAAGATGA AGAAATTGAT
ATTGAAGGAT TAGCTTATGC TGATAATTAC CTGTGGTTCA CAGGTTCTCA TAGCTACAAG
CGTAAAAATA TTAAATCAGA TAATACAGAT GAGAAAAATA TTTCTCGGTT AGCCAAAGTT
ACGTCGGAAG AGAATCGCTA CATATTAGGA CGAATTCCCC TTGTCAAGGG TCAATTATTT
AAGTCTTGCT CTCATCCGCA AGATGCAGGT AAGCGGTTAG TTGCTGCAAA ATTAGAGTTA
ATCAAGCAAG GAAATGTTTT GATGTCAGCT TTGGCTGATG ATCAGCATTT AGGTTTCTTT
GTCAAAGCTG CAATACCTGG TAAAGATAAT GGCTTTGATG TTGAAGGTTT AGCTGTGTAC
GAAAACAAAG TTTTCTTGGG TTTACGTGGC CCTGTGTTGC GAGGTTGGGC GATTATTTTG
GAAATTGCGC TACAAGATTC CCAGCCAGGT TTAATGAGAC TATGGGAGTC TGAAAAAGGT
GGAAAGACGT ACAAAAAACA TTTTGTTTGG TTGAATGGCT TAGGAATTCG TGACTTATGT
CTGGCTGGAA AAGACTTGTT AATTTTAGCT GGGCCAACGA TGGATTTAGA TGGGCCTGTA
CAAGTTTATC GATTGGAAAA TGGTGTAAAT TTACAAGAAA ATATTCTCAA TAAACCAGAA
TTAGTCCAAG AAATTCCCTA TGGCGATCGC AATGATCATG CTGAAGGTAT AACATTATTT
GAGGATGTAT CCGGTGTACC TTCCATATTG GTAGTGTATG ACTCTCCAGC CCAGAATAGA
CTAGTGGGTG ATGCTAGCGT TATCGCTGAT GTGTTTCCAC TAGGTTAA
 
Protein sequence
MVKFRPLQQV SLIFNNTFQQ HREDISAILL TQEKHLWLGS DETATIERLY LVDGDKFSDH 
KQFRVAEFID LPAPEDEEID IEGLAYADNY LWFTGSHSYK RKNIKSDNTD EKNISRLAKV
TSEENRYILG RIPLVKGQLF KSCSHPQDAG KRLVAAKLEL IKQGNVLMSA LADDQHLGFF
VKAAIPGKDN GFDVEGLAVY ENKVFLGLRG PVLRGWAIIL EIALQDSQPG LMRLWESEKG
GKTYKKHFVW LNGLGIRDLC LAGKDLLILA GPTMDLDGPV QVYRLENGVN LQENILNKPE
LVQEIPYGDR NDHAEGITLF EDVSGVPSIL VVYDSPAQNR LVGDASVIAD VFPLG