Gene Ava_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0338 
Symbol 
ID3682771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp436092 
End bp436670 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID637715666 
Productthioredoxin-related 
Protein accessionYP_320859 
Protein GI75906563 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.484295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAG ACTCACCCAT TAAGCCGGAA ACTACTGCGG GAGAGCGGTT GAGAAACTTT 
TTAGTTGCAA TGGTGGCGAT CGCTCTCACC GTTGCCTTAG TCTTAGGGTT ACGGACGGAA
ACGGCTGCTG TATCTCTGGA TAAATTATAT GCAGCTTCTA CTCCTCTAGA AGTGGCTATC
AGCAACGGCA AACCTTCTAT GGTGGAATTT TACGCTAACT GGTGTACTGT TTGTCAAAAA
ATGGCTCCAG ATATTGCAGA ATTTGAACAA CAGTATGCTG ACAAGGTGAA TTTTGTCATG
CTCAATGTAG ATAATACCAA GTGGTTGCCG GAGATGCTGA AATATCGAGT AGACGGTATT
CCTCACTTTG TATTTTTAAA CAAAGAGGGG GAAAGTCTAG CCCAGGCGAT CGGCGATCAA
CCCCATACAA TTATGGCAAG TAATTTAGAA GCCTTGGTGA CTGGTTCCGC TTTACCCCAT
GCTCAAACTA GTGGACAAGT TTCTCAAGTC TCTACACCAG TTGCACCTAT CGGTAGTCAA
GACGATCCTC GCAGTCATGG TAGTCAAGTG GTGAATTAG
 
Protein sequence
MTTDSPIKPE TTAGERLRNF LVAMVAIALT VALVLGLRTE TAAVSLDKLY AASTPLEVAI 
SNGKPSMVEF YANWCTVCQK MAPDIAEFEQ QYADKVNFVM LNVDNTKWLP EMLKYRVDGI
PHFVFLNKEG ESLAQAIGDQ PHTIMASNLE ALVTGSALPH AQTSGQVSQV STPVAPIGSQ
DDPRSHGSQV VN