| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0293 |
|---|
| Symbol | |
|---|
| ID | 3682882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 371617 |
|---|
| End bp | 372771 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637715621 |
|---|
| Product | UDP-sulfoquinovose synthase |
|---|
| Protein accession | YP_320814 |
|---|
| Protein GI | 75906518 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCC TAGTTATTGG TGGCGATGGA TACTGCGGTT GGGCAACCGC ACTTTATCTT
TCCAATCGCG GTTATGAAGT TGGAATATTA GATAGTTTGG TGCGTCGGCA CTGGGATAAT
GAACTGGGTA TCGAAACTCT GACTCCGATC GCCCCAATTC AGCAACGTCT CCAGCGCTGG
CAAGATTTAA CAGGCAAATC TATTGACCTG TTTGTTGGCG ATATTACCAA CTATGAATTT
CTCCAAAAAG CGTTGCATAA ATTTGAGCCA AATGCCATAG TCCATTTTGG CGAACAGCGT
TCAGCACCAT TTTCGATGAT TGACCGTGAA CACGCAGTTG TTACCCAGGT CAATAACGTT
GTGGGTACGT TGAATTTGCT GTATGCAATG AAGGAAGATT TTCCTGACTG TCACTTAGTG
AAGTTAGGAA CAATGGGGGA ATACGGCACA CCTAATATTG ATATCGAAGA AGGCTACATC
ACCATTGAAC ACAATGGACG CAAGGATACC CTACCTTATC CCAAGCAACC CGGTTCAATG
TACCACTTGA GTAAAGTTCA TGATAGCCAC AATATCCATT TTGCCTGTCG GATTTGGGGA
TTGCGGGCAA CAGACTTAAA TCAAGGTGTG GTTTACGGCG TTCTCACCGA AGAAACGGGG
ATGGACGAAC TCTTAATTAA CCGACTAGAT TATGATGGTG TGTTTGGTAC AGCGCTCAAC
CGTTTCTGCA TTCAAGCTGC AACTGGTCAT CCCCTAACTG TTTATGGTAA AGGTGGGCAA
ACGCGCGGAT TCTTGGATAT TCGGGATACG GTGCGATGTG TAGAACTAGC GATCGCTAAT
CCGGCTCCAT CGGGTGAGTT TCGTGTCTTT AACCAATTTA CTGAACAATT CAGTGTTGGT
GACCTGGCAT TAATGGTGAA AAAAGCTGGC AATGCCTTGG GACTAAATGT AGAGATCAAT
AACCTCGATA ATCCCAGAAT CGAAAAAGAA GAACATTACT TCAATGCCAA AAACACTAAA
CTACTCGATT TAGGCTTGCA ACCTCATTAT CTCTCTGATT CTCTGCTAGA TTCTCTCTTA
AACTTTGCTG TCAAGTATCA AGGACGAGTT GATCAAAAGC AAATTTTACC CAAAGTCTCT
TGGCATAGAA ATTAA
|
|---|
| Protein sequence | MKVLVIGGDG YCGWATALYL SNRGYEVGIL DSLVRRHWDN ELGIETLTPI APIQQRLQRW
QDLTGKSIDL FVGDITNYEF LQKALHKFEP NAIVHFGEQR SAPFSMIDRE HAVVTQVNNV
VGTLNLLYAM KEDFPDCHLV KLGTMGEYGT PNIDIEEGYI TIEHNGRKDT LPYPKQPGSM
YHLSKVHDSH NIHFACRIWG LRATDLNQGV VYGVLTEETG MDELLINRLD YDGVFGTALN
RFCIQAATGH PLTVYGKGGQ TRGFLDIRDT VRCVELAIAN PAPSGEFRVF NQFTEQFSVG
DLALMVKKAG NALGLNVEIN NLDNPRIEKE EHYFNAKNTK LLDLGLQPHY LSDSLLDSLL
NFAVKYQGRV DQKQILPKVS WHRN
|
|---|
| |