Gene Ava_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0292 
Symbol 
ID3682881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp369588 
End bp370979 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content39% 
IMG OID637715620 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_320813 
Protein GI75906517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTA ACTTTACTGC ATTGCTAATC ATGCCCGTCC TTTTCAGCAG CTCAGTTAAT 
GTACAAAAAC ATACACCCAC ATCAAAGATT GATACCAGTA ATTCCTCTAC TGTTCAAGAA
GTCAAAGCAC CTAAACACAC TTTATTAGCC GCAGCTACTA CACCAAAAAC CTATTATGTA
AGTGGTACGG GAAAAGACAG CAATAATGGA CTCTCCAGAA CTACTCCCTT TAGAACAATT
CAAAGAGCTG CAGATTTGAC CAACCCAGGG GATACAGTCA TAATTATGAA CGGACTGTAC
ACAAATCCAT ACCCTGGTGC TGGCTATGCT GTATCCATAA CTCGCTCTGG TAACGCTAAC
GCATGGATCA AATTTCGGGC ATCTAGTGGA CATACACCTA AAATTAAGCA TGATGCTTGG
AATGGGATTT ATATTGGCGA TGGAGCCTCT TATGTCGAGA TCCAAGGGCT AGAGATAGAA
GGGAATAATG ACAATATCAG CCTTGATTAT GCTAGAGAAC AGCAGTATAA CCTTTATAAT
CCCTGGACAA TCGGAAATTG TATCACCATT GATGGACGGA ACAATGGTCA TCCGCATCAC
ATCCGAATCC TCAACAACAA GATACATGGA TGCGGCGGTG GTGGTATTGC TGTAATTCAA
GCAGACTATG TAACGATAGA TGGCAATGAA GTCTATAACA ATGCTTGGTA CTCTCCTTAT
GCTAGCAGTG GTATTTCGGT CTATCAGAAT TGGAATTATG ATAGCAATAA GGGATACAGA
ATGTATGTTA CCAACAATCG GGTTTATGAT AATCGACAGT ATATTCCCTT CGTATACAGT
GGGAAAATTG AAGATGGTAA TGGTATCGTC ATCGATGATT TAAGAAATAC TCAAGGCGGA
TCAACTTTAG GCCCCTATCT AGGACGTACT TTGGTTGCTA ACAATCTTAC ATATAAAAAT
GGTGGTACGG GCATTCATAC CTACCTCAGT GAAAATGTAG ATATTGTTCA CAATACTGCT
TATTTGAATA ACCAAAGCCC AGAAATCTCT CATGGGCAAA TCTTTGCTAA TGCCTCGTCA
AATGTCAAGG TGTGGAATAA CATTCTTTAC GCTTATCCTG GCAAAAATGT CAACAATAAC
TGGAGCAATA CAAATGTTAG TTATAACTAC AATGTATACG CTAATAGTTC CTTGATCACT
GTGATGGGAG CTAATGATAT TATTGCAGAC CCCCAGTTTG TTAACCCATC CCTAAACAAC
TTCCAATTGA ATGTAACTAG TCCAGCAATT AACAATGGTT ATACCTGGAG TCAATTAAAG
AAAGATATCC TCAGTAATCC TCGTCCTTCT GGTATTAAAT ATGATGTCGG TGCATACGAG
TATCAGTTTT AG
 
Protein sequence
MKTNFTALLI MPVLFSSSVN VQKHTPTSKI DTSNSSTVQE VKAPKHTLLA AATTPKTYYV 
SGTGKDSNNG LSRTTPFRTI QRAADLTNPG DTVIIMNGLY TNPYPGAGYA VSITRSGNAN
AWIKFRASSG HTPKIKHDAW NGIYIGDGAS YVEIQGLEIE GNNDNISLDY AREQQYNLYN
PWTIGNCITI DGRNNGHPHH IRILNNKIHG CGGGGIAVIQ ADYVTIDGNE VYNNAWYSPY
ASSGISVYQN WNYDSNKGYR MYVTNNRVYD NRQYIPFVYS GKIEDGNGIV IDDLRNTQGG
STLGPYLGRT LVANNLTYKN GGTGIHTYLS ENVDIVHNTA YLNNQSPEIS HGQIFANASS
NVKVWNNILY AYPGKNVNNN WSNTNVSYNY NVYANSSLIT VMGANDIIAD PQFVNPSLNN
FQLNVTSPAI NNGYTWSQLK KDILSNPRPS GIKYDVGAYE YQF