| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0227 |
|---|
| Symbol | |
|---|
| ID | 3683030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 291286 |
|---|
| End bp | 291735 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637715555 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_320748 |
|---|
| Protein GI | 75906452 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1403] Restriction endonuclease |
|---|
| TIGRFAM ID | [TIGR02646] conserved hypothetical protein TIGR02646 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAGTC GTAAAATTTC CGATGCAATT CAGCAACAAA TACGTCAACG AGCCTCTGAA
TTATGTGAAT ATTGCCACGC CTCTGAAAAA TGGCAGTATG TATTATTTAC GGTGGATCAT
ATTATTCCCT TAAGTCAAAA CGGTGAAGAT ACTATAGAGA ATTTGGCTTT AGCTTGTTTT
CATTGCAACC GTAGAAAGTC AGCCAAAACC ACAGCTTTAG ATCCTGAATC TGGTTTAGAA
GTTCCATTAT TTAATCCAAG ACAAAGCCTT TGGAGTGAGC ATTTTATTTG GTCTGCCGAT
AAACTAAAAA TTAATGGGTT AACACCGACT GGCAAAGCAA CAATAGCGGC GCTAAATTTA
AACCGAGAAA GAATTGTGAA TATTCGTGCG GCTGACAAAG TAGTTAACCG CCATCCTCCG
CCAGAAGATC CAATCGAAGA AATAAGTTAA
|
|---|
| Protein sequence | MASRKISDAI QQQIRQRASE LCEYCHASEK WQYVLFTVDH IIPLSQNGED TIENLALACF
HCNRRKSAKT TALDPESGLE VPLFNPRQSL WSEHFIWSAD KLKINGLTPT GKATIAALNL
NRERIVNIRA ADKVVNRHPP PEDPIEEIS
|
|---|
| |