Gene Ava_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0171 
Symbol 
ID3683251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp225314 
End bp226186 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content38% 
IMG OID637715498 
Producthypothetical protein 
Protein accessionYP_320692 
Protein GI75906396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000544812 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.222302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGC TGGGGAATGA AGGTGAGGAC ATCATAGGAA TTTGGTCTGA GGAAAAATTA 
GATTTACTAG CAAAATATCT TAAGGCTTAC TCCGTGATCA TGAGTGAGCA AAAGAAAAGC
TGGCTCAGAG CTTACTACTA CATTGATGCT TTTGCTGGAT CTATTAGGCC TAGAGCTAAA
GAAGATGAGC AACGATATAT TGATGGTTCA CCTTTAAGGG CTTTACAGAC AGAACCTCAA
TTTGATGGTT ACTGGTTTAT AGATATTTCA CCACGAAGAG TAGAGCGAGT TGAAAAACTT
CGTGAAGAGT TTCCGCACTG TGCAATTGAG ATAAGTCAAG GAAACTGTAA TCAGGTTTTA
TGTAACGAAA TTATTCCTCG AATTCCTTAT CAATCAAAGA CACGGGCATT TGTCTTTTTA
GATCCTTACG GGCTGCAAAT TGATTGGGAT ACAGTTAGGG AATTAGCAAA TACTAGAACT
TGTGACATCT TTGTCAATTT CTCTGTTATG GGCGTTACTC GTTTGCTGCC TAGAGATCAA
TCTCCAGACC CAGAAGTAAT AGAGCAATTG AACAAGGTGA TGGGTAGTAC CGATTGGATT
AATCAGATAT ATCAACCACC TGTTCAACTA AGTTTATTTC CAGAACAAGA ACCAGCCTTA
AGTCGTGAAA CTATCAAAGC TGAATGGTTG GCAAGTTTGT ATACAAAGCA ACTGAGTTCA
CTTTTTCCCC ACGTTAGTAA ACCAGTTCTC ATGAAAAACT CAACTAATTC AGTGCTTTAT
GCTTTGTGTT TAGCAAGTCA TAATCCGACA GCAATTAACA TTACGAATGA TATTTTCGCT
CGGTATGAAC GTTTAAAAAA ATTTGGCAGC TAG
 
Protein sequence
MSRLGNEGED IIGIWSEEKL DLLAKYLKAY SVIMSEQKKS WLRAYYYIDA FAGSIRPRAK 
EDEQRYIDGS PLRALQTEPQ FDGYWFIDIS PRRVERVEKL REEFPHCAIE ISQGNCNQVL
CNEIIPRIPY QSKTRAFVFL DPYGLQIDWD TVRELANTRT CDIFVNFSVM GVTRLLPRDQ
SPDPEVIEQL NKVMGSTDWI NQIYQPPVQL SLFPEQEPAL SRETIKAEWL ASLYTKQLSS
LFPHVSKPVL MKNSTNSVLY ALCLASHNPT AINITNDIFA RYERLKKFGS