Gene Ava_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0147 
Symbol 
ID3683286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp196514 
End bp197938 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content45% 
IMG OID637715474 
ProductL-glutamine synthetase 
Protein accessionYP_320668 
Protein GI75906372 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CACAAGAAGT CTTGAAGAGA ATTCAAGATG AAAAAATTGA GCTGATTGAC 
CTCAAGTTCA TCGACACTGT AGGTACTTGG CAACACCTCA CCTTGTACCA AAACCAAATC
GATGAAAGCT CCTTCACCGA TGGCGTACCT TTTGACGGTT CCAGCATCCG GGGTTGGAAA
GCAATCAACG AGTCAGACAT GACAATGGTT CTCGATCCTA ATACTGCTTG GATCGACCCA
TTCATGGAAG TACCAACCCT AAGTATTGTT TGTAGCATCA AAGAACCACG TACAGGAGAA
TGGTACAACC GTTGTCCACG GGTTATTGCT CAAAAAGCAG TTGATTATTT GGTTGCCACT
GGCATTGGTG ATACAGCATT TTTTGGCCCT GAAGCTGAAT TTTTTATCTT CGATAGCGCC
CGCTTTGCCC AAACCGCTAA CGAAGGTTAC TACTTCCTCG ACTCTGTAGA GGGTGCTTGG
AATTCTGGTA AAGAAGGTAC AGCAGACAAA CCCAACTTGG CTTACAAACC ACGTTTTAAA
GAGGGTTATT TCCCTGTTTC CCCCACAGAT TCTTTCCAAG ACATCCGCAC AGAAATGCTG
TTGACGATGG CGAAATTAGG CGTACCCATC GAAAAACATC ACCACGAAGT TGCTACTGGT
GGTCAGTGCG AACTTGGTTT CCGCTTCGGT AAGTTAATCG AAGCTGCTGA CTGGCTGATG
ATTTACAAAT ATGTCATCAA GAACGTTGCC AAAAAATATG GCAAAACCGT CACCTTCATG
CCAAAACCAA TTTTTGGCGA TAACGGTTCT GGTATGCACT GTCACCAATC TATCTGGAAG
GATGGTAAAC CCCTCTTTGC AGGTGACCAG TATGCTGGTT TAAGTGAAAT GGGACTGTAC
TACATTGGTG GTCTTCTCAA GCACGCCCCA GCACTGTTGG CAATCACCAA CCCCAGCACC
AACTCCTACA AACGCCTAGT TCCCGGTTAT GAAGCGCCAG TTAACTTGGC TTACTCCCAA
GGTAACCGTT CTGCTTCCAT CCGGATTCCT TTGTCTGGCA CTAACCCCAA AGCCAAGCGT
TTAGAGTTCC GTTGTCCAGA TGCTACCTCT AACCCTTATT TGGCATTTGC TGCCATGCTG
TGCGCTGGTA TCGATGGTAT CAAGAACAAA ATTCATCCTG GTGAGCCATT AGATAAAAAT
ATCTATGAAC TTTCTCCAGA AGAATTGGCA AAGGTTCCTT CCACACCCGG TTCTTTAGAG
CTAGCATTGG AAGCACTAGA AAACGACCAC GCTTTCTTAA CAGATACAGG CGTGTTCACC
GAAGACTTTA TCCAAAACTG GATTGACTAC AAACTCGCTA ACGAAGTTAA ACAGATGCAA
CTGCGTCCTC ATCCTTATGA GTTCTCTATC TATTACGACG TTTAA
 
Protein sequence
MTTSQEVLKR IQDEKIELID LKFIDTVGTW QHLTLYQNQI DESSFTDGVP FDGSSIRGWK 
AINESDMTMV LDPNTAWIDP FMEVPTLSIV CSIKEPRTGE WYNRCPRVIA QKAVDYLVAT
GIGDTAFFGP EAEFFIFDSA RFAQTANEGY YFLDSVEGAW NSGKEGTADK PNLAYKPRFK
EGYFPVSPTD SFQDIRTEML LTMAKLGVPI EKHHHEVATG GQCELGFRFG KLIEAADWLM
IYKYVIKNVA KKYGKTVTFM PKPIFGDNGS GMHCHQSIWK DGKPLFAGDQ YAGLSEMGLY
YIGGLLKHAP ALLAITNPST NSYKRLVPGY EAPVNLAYSQ GNRSASIRIP LSGTNPKAKR
LEFRCPDATS NPYLAFAAML CAGIDGIKNK IHPGEPLDKN IYELSPEELA KVPSTPGSLE
LALEALENDH AFLTDTGVFT EDFIQNWIDY KLANEVKQMQ LRPHPYEFSI YYDV