Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0135 |
Symbol | |
ID | 3683274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 179691 |
End bp | 180119 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637715462 |
Product | nuclease (SNase-like) |
Protein accession | YP_320656 |
Protein GI | 75906360 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000156916 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAC TTGAGCTAAT TTTATTACTG GCTACCATCG TAGGTGTAGT AGACGGCAAA ACTATCACAG TTAAAAATGA TACTGGGCAA ACGGCTACAG TCAGACTAGC CTGTATTGAT ATACCCAAGA CAGCTAAACA AAAGTATCAT CTAGCGGCTA AACAGAAACT CCAACAATTA CTACCATCCC GCACCCCTGT TGTGATTAGA ATTATCAGAC CGGATAGTAA AGATATTGCT TTTGGCGAAG TTTATGTAGA TAATCGCTCT ATCAATCTGC GTTTAGTAGC AGAGGGTAAT GCTGTGGTTG ATCAAGCATC TCTCGAAGTT TGCGAAGAGA CAAAAACACA ATACCTCATC GCTGAAGCCA ATGCTAAAAA TAAACGCCTG GGACTATGGC AACAGTTAAA TCCAGCAATT ACTAAATAG
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Protein sequence | MALLELILLL ATIVGVVDGK TITVKNDTGQ TATVRLACID IPKTAKQKYH LAAKQKLQQL LPSRTPVVIR IIRPDSKDIA FGEVYVDNRS INLRLVAEGN AVVDQASLEV CEETKTQYLI AEANAKNKRL GLWQQLNPAI TK
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