Gene Ava_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0135 
Symbol 
ID3683274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp179691 
End bp180119 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID637715462 
Productnuclease (SNase-like) 
Protein accessionYP_320656 
Protein GI75906360 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000156916 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAC TTGAGCTAAT TTTATTACTG GCTACCATCG TAGGTGTAGT AGACGGCAAA 
ACTATCACAG TTAAAAATGA TACTGGGCAA ACGGCTACAG TCAGACTAGC CTGTATTGAT
ATACCCAAGA CAGCTAAACA AAAGTATCAT CTAGCGGCTA AACAGAAACT CCAACAATTA
CTACCATCCC GCACCCCTGT TGTGATTAGA ATTATCAGAC CGGATAGTAA AGATATTGCT
TTTGGCGAAG TTTATGTAGA TAATCGCTCT ATCAATCTGC GTTTAGTAGC AGAGGGTAAT
GCTGTGGTTG ATCAAGCATC TCTCGAAGTT TGCGAAGAGA CAAAAACACA ATACCTCATC
GCTGAAGCCA ATGCTAAAAA TAAACGCCTG GGACTATGGC AACAGTTAAA TCCAGCAATT
ACTAAATAG
 
Protein sequence
MALLELILLL ATIVGVVDGK TITVKNDTGQ TATVRLACID IPKTAKQKYH LAAKQKLQQL 
LPSRTPVVIR IIRPDSKDIA FGEVYVDNRS INLRLVAEGN AVVDQASLEV CEETKTQYLI
AEANAKNKRL GLWQQLNPAI TK