Gene Ava_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0125 
Symbol 
ID3683342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp167223 
End bp168374 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content47% 
IMG OID637715452 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_320646 
Protein GI75906350 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATC TGTTAGCCCC TTTACAATCA TTAAACCAAG GTCACTGGTT CAAGCTCATC 
TGTGGAGCTA GTTTCCAGCA CCTACCTGCT GTGAGAAGTT TAACATTGGC CTACACCTTA
GCTGGTGCTG ACTGCATAGA TGTGGCTGCT GACCCAGCCG TGATTAGAGA TGCCAAAGAA
GCAATACAAG TAGCTAGAAA TTTGGTGAAA GCAGCTCAAG CAAGAGGATT GGATTACCAA
GGTCATGCAC CTTTATTGAT GGTGAGCTTA AATGACGGCG AAGACCCTCA TTTCCGCAAA
GCCGAGTTCA ATCCCCACCA TTGTCCTGCT GATTGTCCCA GACCTTGCGA GAAAATCTGT
CCTGCTCAGG CAATTGTATT TAATCATCAA AAAGATAATT TTTCTGGAGT TGAATCTCAG
AAATGCTACG GTTGCGGCCG TTGTCTGCCA GTTTGTCCTT ATGATATAAT TTATACAAAT
TCCTATATGT CAACGCCAGA GGCGATCGCG CCAATGGTCA TGTCAGCAGG AATAGATGCC
GTAGAAATCC ATACAAAAGT GGGACGTTTG GCAGAGTTTA AGCAATTATG GCAAGTAATT
TCACCGTGGG CAGACCAACT AAAGGTATTG GCTATCAGCT GTCCCGATGG CAAGCATCTA
GTTGAATATC TCCAATCAAT CTATGAACTA ATTTCTCCAC TTCCTACCAC CTTAATCTGG
CAAACCGACG GTCGCCCCAT GAGTGGCGAT ATTGGAGATG GTACTACTTT AGCAGCAGTG
AAACTAGGGC AAAAAGTCCT AGCAGCTAAA TTGCCAGGAT ATATACAGCT AGCAGGTGGC
ACTAACAGCT ACACAGTTGC TAAGTTAAAG GCAATGGGAC TACTGAAAAA AGCCAGGGAG
CAGGGAGCAG ACAGTAGGGG GGAAATATCT CCTCTGACCC CTCACCCCTC CGTCTCCATC
GCTGGAGTTG CTTACGGTAG CTACGCCCGT GTAATGCTGT CACCGATTAT TGAGCAGTTA
GAAAAGAAGG AGGTGAGTAA TAGCAGTGTT AAGGCCACAG TACGCCTTGA AGAAGAACCA
GAATTGCTTT GGCAAGCCGT AGAGCTTGCC CGTTCCCTCG TTTCCCAGCT CAAGTCACAG
CAGGAGAGCT AA
 
Protein sequence
MTDLLAPLQS LNQGHWFKLI CGASFQHLPA VRSLTLAYTL AGADCIDVAA DPAVIRDAKE 
AIQVARNLVK AAQARGLDYQ GHAPLLMVSL NDGEDPHFRK AEFNPHHCPA DCPRPCEKIC
PAQAIVFNHQ KDNFSGVESQ KCYGCGRCLP VCPYDIIYTN SYMSTPEAIA PMVMSAGIDA
VEIHTKVGRL AEFKQLWQVI SPWADQLKVL AISCPDGKHL VEYLQSIYEL ISPLPTTLIW
QTDGRPMSGD IGDGTTLAAV KLGQKVLAAK LPGYIQLAGG TNSYTVAKLK AMGLLKKARE
QGADSRGEIS PLTPHPSVSI AGVAYGSYAR VMLSPIIEQL EKKEVSNSSV KATVRLEEEP
ELLWQAVELA RSLVSQLKSQ QES