Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0103 |
Symbol | |
ID | 3683378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 136399 |
End bp | 137841 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637715430 |
Product | hypothetical protein |
Protein accession | YP_320624 |
Protein GI | 75906328 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0364261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACAA CGACTGACCT CGATTTTGCC GCACGCGAGG CTTTGCGCTT ACTTGGCCCC GATCCCGAAA ACTGGGTGAG CGATCGCCCA GACATTGACC ACAATGTGAC GATAGTAGGT GGTAGTGGCA GTGGTAGTAC TTTCGCATTT GCTCTACGAC GTGCTGGTAT TGGTCGCGTA ACAGTTATCG ACGCGGCTCT TGACGAAGGC CATGCAGGTG TATGGCTGAC GCGAGCGCGG ATGAAAAAGC TACGCACACC AAAAAATCTG CCAGGGCCAG AACTAGGCGT TCCCGCGCTG TCTTTTCAGG CTTGGTATGA GGCACGGCAC GGTGTTGAGG CATACGCAGC TATTGACCGG ATTCCACGAG TATTATGGGC TGAGTATCTC AGTTGGTATC GGCATTTCTT GAATATTCCA GTTAGGTATC AGACGAAGTT GGTGCGAATT GAGCCAGTAG CAGGTTTCTT TCGTCTACAC CTGGAAGTGA GTGGTGTTTC GCAGATAGAA ACGACACGTA AGATTATCTT CGCCAATGGT GTAGCTGGTA CTGGTGGCCC AAACATACCG CCTGTACTGG CATCTCTGCC GCGCAAGTTA TATGCACATA CCTCTGATGA AATTGATTTC CATGAGTTAC GCGGCAAGAC TGTAGCTGTT CTGGGTGCGG CGGCTTCAGC TTTCGATGCC GCAGGAGTAG CACTGGAATC AGGTGCGAAA GAAGTACACC TGTTTGCACG ACGGTCTGAA ATCGCATCTT TACCTGTGAT TCGTGTGCGG GGTTATCCTG GTGCTTACTA TAACTATGCA CAACTACCTG ATGCGGCTCG TTGGTTCCAA GCTTGGCGAT TTAATCAGGC TGGCTCTACA CCACCGCCAG ATGCAATTGA ACGAGTAACT GCATTTTCTA ACTTTCATCT GCACTTATCT GCACCTTGGA GAGAGGCTCA TAACCAGGGC GATCGCATTG TGGCTCAGGT GAATGATGAT GTTTTTGAGT TCGATTTTGC GATCGCTGGG ACTGGCTATT TTGTTGACCC GACCAAGCGG CCAGAACTTG CTGATTTTGC CCATCATATT GCCCTTTGGC GCGATCGCTA CGAGCCACCA GCCGATCAGC GCAACGAACA ACTTAGTACT TACCCTTATC TTGGTAACGC CCATGAATAC CAAGAAAAAG TCCTTGGTAG TGCGCCTTAC TTAAAGGATA TTCATGTTTT CAATCCTGCT GGCTTCGTCA GTTTCGGTCT GCCCATTGGC GATGTACCTA GCATCAGGCG TGATGTGCCA GCAATAGTAT CACGTATCAG CCACGACTTA TTCTTTGCGG ACTGGTCATT ACACGAAGCC CGGATTACTA GTGATAACGT GGCACCAGAC TTCGAGCCAT CACTGTACGC AGATGCAGTA TGGAAAGAGG CAGCTAAGGT GGGAGTCAGC TAA
|
Protein sequence | MTTTTDLDFA AREALRLLGP DPENWVSDRP DIDHNVTIVG GSGSGSTFAF ALRRAGIGRV TVIDAALDEG HAGVWLTRAR MKKLRTPKNL PGPELGVPAL SFQAWYEARH GVEAYAAIDR IPRVLWAEYL SWYRHFLNIP VRYQTKLVRI EPVAGFFRLH LEVSGVSQIE TTRKIIFANG VAGTGGPNIP PVLASLPRKL YAHTSDEIDF HELRGKTVAV LGAAASAFDA AGVALESGAK EVHLFARRSE IASLPVIRVR GYPGAYYNYA QLPDAARWFQ AWRFNQAGST PPPDAIERVT AFSNFHLHLS APWREAHNQG DRIVAQVNDD VFEFDFAIAG TGYFVDPTKR PELADFAHHI ALWRDRYEPP ADQRNEQLST YPYLGNAHEY QEKVLGSAPY LKDIHVFNPA GFVSFGLPIG DVPSIRRDVP AIVSRISHDL FFADWSLHEA RITSDNVAPD FEPSLYADAV WKEAAKVGVS
|
| |