| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0227 |
|---|
| Symbol | |
|---|
| ID | 3678026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | + |
|---|
| Start bp | 266674 |
|---|
| End bp | 268530 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637715307 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320501 |
|---|
| Protein GI | 75812884 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00569687 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGA AAAGCAAACG CAAGCCTTCA GGAGAAATAC GGCAAAGCCA AATTATCTCC
ACCTTTGGCC CCGGCGCAAT GGTGGACTTA CCAAATTACT CAGTCATCAT CGGCGGACTC
AACCACTGGC GGGGTAATAG ACGGCGAATT TACGAAGACC GCCTTGCAGC GAGGGTTGCC
GAGATTTTGG ATGTCAGAGA CATTGCTATG TATGCACCAC CTACAGACGA GCAAGACCCA
GCCGCCGCCA GAAGTGGAAT TTCAGCTTTT ACCTTCCCCA CTTGGTTTGT CGCCCAAGTA
GAAGAAACTT GGACTTCCCC TAACGCCAAA GAATACCGTA CTCGTCCTCT GATTCCTTGG
GGTAGTCTAG TTAAAGGTAA ATATCTCAGC GATACCAAAA AGAAAATCCC AGTTGTCCCC
GTTCGCTTTG TCCAAGCCTG TGTTAACGGA CACATCAGTG ATATCCACTG GTATCGCTTT
GTCCACAGCA ATAGCGATAC CAGTAAATGC CGGGGTCAAC TTTGGCTTGA CGAACGTGGT
TCTGGCAACG ATTTCGTAGA TATCTTCGTT CGCTGTCAAG CCTGCGGCGC TCGTCGTCCC
CTCTCCGATG CCACAGTACC CAATGGCAAA ATTTTGGATC AATGTCTGGG GCATCGTCCT
TGGCTAGGGC CAAAAGCTTT TGAACCTTGC GTTTCCCGCG TCACTGGTAA ACCAGAGTAC
AACCGACTGC TAGTAAGAGC TGCAAGTAAT ACTTACTTTT CTCAAGTTTT GAGTGTTATC
TCCCTCCCAG ACTCAGATGA AGCCCTGCGA ACAGCAGTTA ATTTAGTCTA TGAAGACTTT
CTTCAGTATG CAGAAAGCTC AGATGATGTC AAAAGAGAAC GCCGCAAACA AAAAGTTGCC
AACGCCTTGG AGGGATTTAG CGATGAAGCT GTATGGGCAG AAATACGGCG CAAGCAAAGT
GGACAAGGAG ACCAAGGTAA AAGTATTAAG CAAGTAGAAA TTGAAACATT GCTTTCCAGC
CCAGAAGAGA TGGGAGAAGA TGCTCCAGAT GGTGACTTTT ACGCCCGCGC CCGCAAGTTA
ACTGCTTTGC CCTCATTATT ATCGTCTCGT ATTCACCGGA TTATTTTAGT ACATCGGTTA
CGAGAGGTCA TTGCCCAAGT CGGGTTCACC CGCTTTGAAC CTGCAATGCC TGATATTGAT
GGCGAACTGG CACTGGATGT GCGACGGGCA GCCCTTGATA TCGAACCAAG CTGGGTTCCT
GCCATCGAAA ACCGTGGTGA AGGTGTATTT ATCAGCTTTC AAAAACAGGC AATCGAAAAC
TGGGTAAAGC AGCCTGCGGT GCAAAAACGT GGGCTGGAAT TGTTGAGGGG CTTCGAGGTG
TGGCAGAAGC GCAAGGCACT CCCAGAAGCT AAATTTCCTG GGCTACCTTA TATTATGCTG
CATTCTTTAT CACATTTATT GATCACAGCA GTATCTCTAG AGTGTGGTTA TGCTGCTTCA
TCAATTCGTG AACGCATTTA TGTTGGTGAC ACTGGCTATG GAATTCTTTT ATACACTGGT
TCCCCTGGGT CGGAAGGAAC TTTGGGAGGT CTGGTACAAA TTGGCAAGCG AATTGAGTAC
CATCTAACTG CTGCCCTAGA ATTAGGAAAG CTCTGTTCTA ATGACCCTGT TTGCGCCCAA
CATCAGCCAG ACAACGTACA AGAGGAGCGT TTTTTGCATG GTGCAGCCTG TCATGGGTGT
TTATTAATTG CTGAATCTTC CTGCGAACGT GGTAACGAAT TTCTTGACCG GGCGCTTGTC
GTAGCTACAG TTGAGGGTTT GGGTGCTGAG TTTTTTCTCA ATCAGGAATT GTCATGA
|
|---|
| Protein sequence | MKSKSKRKPS GEIRQSQIIS TFGPGAMVDL PNYSVIIGGL NHWRGNRRRI YEDRLAARVA
EILDVRDIAM YAPPTDEQDP AAARSGISAF TFPTWFVAQV EETWTSPNAK EYRTRPLIPW
GSLVKGKYLS DTKKKIPVVP VRFVQACVNG HISDIHWYRF VHSNSDTSKC RGQLWLDERG
SGNDFVDIFV RCQACGARRP LSDATVPNGK ILDQCLGHRP WLGPKAFEPC VSRVTGKPEY
NRLLVRAASN TYFSQVLSVI SLPDSDEALR TAVNLVYEDF LQYAESSDDV KRERRKQKVA
NALEGFSDEA VWAEIRRKQS GQGDQGKSIK QVEIETLLSS PEEMGEDAPD GDFYARARKL
TALPSLLSSR IHRIILVHRL REVIAQVGFT RFEPAMPDID GELALDVRRA ALDIEPSWVP
AIENRGEGVF ISFQKQAIEN WVKQPAVQKR GLELLRGFEV WQKRKALPEA KFPGLPYIML
HSLSHLLITA VSLECGYAAS SIRERIYVGD TGYGILLYTG SPGSEGTLGG LVQIGKRIEY
HLTAALELGK LCSNDPVCAQ HQPDNVQEER FLHGAACHGC LLIAESSCER GNEFLDRALV
VATVEGLGAE FFLNQELS
|
|---|
| |