Gene Ava_C0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0197 
Symbol 
ID3677856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp233186 
End bp234094 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content33% 
IMG OID637715277 
Producthypothetical protein 
Protein accessionYP_320471 
Protein GI75812854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00393973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGAA AAAATAAAGA ACAACCAGCC ATGTCAAATA ATACTTCCTC CAATACTAAT 
GGTAAACCTC AAAAGCGACT GATAATTATA ACAGGTGATA AAGGTGGCGT GGGTAAAAGT
ACCTTTGCAA GAGCAATATT TCAACTTTAT ATTAATAAAA ATCTACCCTG TGTTGCTTAT
GAAGCTGACT TAAGGAATCC TCAGATAGAA AGATATTTTC AAAAAGATTA CCGCCCTATA
ATACGTTATA TTGATATTTT TCATAGAGGT GGTGCTGACG ATTTATTAAT TAATCTAGAT
GAGAGTGATT GTCCTATCAC ATTATTAGAC TTGCCAGCAC AATCTGGATG TTTTTTTGAA
AGTTATGTCA AAGAGCTTGC ATTTTTTGAA GTTCTGAAAA CTGAAATTAA TTGTCGAGTA
ACAATGGTTT CAGTGATTAG TAGAGTTCTT GACTCTATAA ATGTTTTAGA AAAACTTCGT
GAACTTTGTA AAGACCAAGT AGATTATATT GTAGTCAAAA ATCTATTTCA TGGTGAAGAA
GAAAAATTTG AGCGATATAA TGACTCTTCT CTACGTCAGA ATATGCTTGC GGAAGGTCTG
ATAGAACTTG TAATGCCAGA TTTATTCTAC AAGTCTTATG ACTTTCTTGA CCGCCATGCT
TTAACATTTA ATGAAGGTCA GACTCATCAA GAAACAAATA TTGTAATTAA GTCAAGAATT
AAATCTTGGG TTGCTGAGTT TGAAGCGCAA ATTAAGCCAG CATTTAATTT TTTGGGTTTT
GATATACAAC CAGATGACTG TTACTACCCA GCAGTTGTGG AAAAATCTAA AGAGCTTAGA
GAAAACGAAG AAAAAGAAAA AGCTAAAAAC CAAGATGCAA ATTTACCATC TGAAGATATA
GCTGCTTAA
 
Protein sequence
MTRKNKEQPA MSNNTSSNTN GKPQKRLIII TGDKGGVGKS TFARAIFQLY INKNLPCVAY 
EADLRNPQIE RYFQKDYRPI IRYIDIFHRG GADDLLINLD ESDCPITLLD LPAQSGCFFE
SYVKELAFFE VLKTEINCRV TMVSVISRVL DSINVLEKLR ELCKDQVDYI VVKNLFHGEE
EKFERYNDSS LRQNMLAEGL IELVMPDLFY KSYDFLDRHA LTFNEGQTHQ ETNIVIKSRI
KSWVAEFEAQ IKPAFNFLGF DIQPDDCYYP AVVEKSKELR ENEEKEKAKN QDANLPSEDI
AA