Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0197 |
Symbol | |
ID | 3677856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 233186 |
End bp | 234094 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637715277 |
Product | hypothetical protein |
Protein accession | YP_320471 |
Protein GI | 75812854 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00393973 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCGAA AAAATAAAGA ACAACCAGCC ATGTCAAATA ATACTTCCTC CAATACTAAT GGTAAACCTC AAAAGCGACT GATAATTATA ACAGGTGATA AAGGTGGCGT GGGTAAAAGT ACCTTTGCAA GAGCAATATT TCAACTTTAT ATTAATAAAA ATCTACCCTG TGTTGCTTAT GAAGCTGACT TAAGGAATCC TCAGATAGAA AGATATTTTC AAAAAGATTA CCGCCCTATA ATACGTTATA TTGATATTTT TCATAGAGGT GGTGCTGACG ATTTATTAAT TAATCTAGAT GAGAGTGATT GTCCTATCAC ATTATTAGAC TTGCCAGCAC AATCTGGATG TTTTTTTGAA AGTTATGTCA AAGAGCTTGC ATTTTTTGAA GTTCTGAAAA CTGAAATTAA TTGTCGAGTA ACAATGGTTT CAGTGATTAG TAGAGTTCTT GACTCTATAA ATGTTTTAGA AAAACTTCGT GAACTTTGTA AAGACCAAGT AGATTATATT GTAGTCAAAA ATCTATTTCA TGGTGAAGAA GAAAAATTTG AGCGATATAA TGACTCTTCT CTACGTCAGA ATATGCTTGC GGAAGGTCTG ATAGAACTTG TAATGCCAGA TTTATTCTAC AAGTCTTATG ACTTTCTTGA CCGCCATGCT TTAACATTTA ATGAAGGTCA GACTCATCAA GAAACAAATA TTGTAATTAA GTCAAGAATT AAATCTTGGG TTGCTGAGTT TGAAGCGCAA ATTAAGCCAG CATTTAATTT TTTGGGTTTT GATATACAAC CAGATGACTG TTACTACCCA GCAGTTGTGG AAAAATCTAA AGAGCTTAGA GAAAACGAAG AAAAAGAAAA AGCTAAAAAC CAAGATGCAA ATTTACCATC TGAAGATATA GCTGCTTAA
|
Protein sequence | MTRKNKEQPA MSNNTSSNTN GKPQKRLIII TGDKGGVGKS TFARAIFQLY INKNLPCVAY EADLRNPQIE RYFQKDYRPI IRYIDIFHRG GADDLLINLD ESDCPITLLD LPAQSGCFFE SYVKELAFFE VLKTEINCRV TMVSVISRVL DSINVLEKLR ELCKDQVDYI VVKNLFHGEE EKFERYNDSS LRQNMLAEGL IELVMPDLFY KSYDFLDRHA LTFNEGQTHQ ETNIVIKSRI KSWVAEFEAQ IKPAFNFLGF DIQPDDCYYP AVVEKSKELR ENEEKEKAKN QDANLPSEDI AA
|
| |