Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0114 |
Symbol | |
ID | 3677822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 136053 |
End bp | 136934 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637715197 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_320391 |
Protein GI | 75812774 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTAG TTTTTGGAGC GACGGGACAG ACAGGTTCAG CAGTGGCTAA CGCTTTGCTT GAGAGAAATT TTCCAGTGCG CGTTGTCTTG CGCTCTGATA AAGCTGCCAG TACATGGCGA GAGAAAGGTG CAGACGTAGC GATTGCCGAA GTCACTGATG TCGAAGCGAT GACCGCCGCG ATGCGTGAAG CGGATGCCGT CTATGTGATG AACCCACCTG CTTACAACGT CAGCGATATG TTTGCGCTGG CAGAACAGAT CGGCGAGTGT TATGTTGAAG CCCTTACAAA CGCTGATGCA CGGAAGGTCG TGTTACTGTC TTCGGTTGGT TCACAGCACG CTTCCGGTAC GGGCAACATT TTGACGACCC ATATTTTAGA GCGCATGTTG GGCAACTTGG CAGTTCCCGT CACAGTTCTG CGAGCAGCAT CGTTTATGGA GAATTGGGGG AGTGCCGCCG CGATCGCTGC CGAACAAGGG GTACTGCCCA GTTTTTTTGC TCCACTCGAT CGTCGGCTGC CTATGGTTTC GACCGAAGAC ATCGGGCGCA CTGCGGCTGA AGCCATGATT GAAGACTGGA AAGGTCAGCG CATCATCGAA CTGCATGGTC CGATCGACTA CTCACCAAAC GATGTCGCTG CTGCTTTTGC CGCTGTGCTT AACCGTAATG TACAGGCAAT TGCTGTTCCC GAAAGCGACT GGCAAGCAAC AATTTCCAGC TTTGGCTTTT CACCTGAAGC CGTCAACAGC TACAGCGAGA TGATGCGCGG TTTCAACTCT GGTCATATCG TCTTTGAAAG TAGCCCAGAG ATAGAAACGC GCACCGGACA AACTGCAATA GAAGCTGCTG TTGATAGATT GACTGGAAGC AAATCCAAGT AA
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Protein sequence | MYVVFGATGQ TGSAVANALL ERNFPVRVVL RSDKAASTWR EKGADVAIAE VTDVEAMTAA MREADAVYVM NPPAYNVSDM FALAEQIGEC YVEALTNADA RKVVLLSSVG SQHASGTGNI LTTHILERML GNLAVPVTVL RAASFMENWG SAAAIAAEQG VLPSFFAPLD RRLPMVSTED IGRTAAEAMI EDWKGQRIIE LHGPIDYSPN DVAAAFAAVL NRNVQAIAVP ESDWQATISS FGFSPEAVNS YSEMMRGFNS GHIVFESSPE IETRTGQTAI EAAVDRLTGS KSK
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