Gene Ava_C0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0114 
Symbol 
ID3677822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp136053 
End bp136934 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content52% 
IMG OID637715197 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_320391 
Protein GI75812774 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTAG TTTTTGGAGC GACGGGACAG ACAGGTTCAG CAGTGGCTAA CGCTTTGCTT 
GAGAGAAATT TTCCAGTGCG CGTTGTCTTG CGCTCTGATA AAGCTGCCAG TACATGGCGA
GAGAAAGGTG CAGACGTAGC GATTGCCGAA GTCACTGATG TCGAAGCGAT GACCGCCGCG
ATGCGTGAAG CGGATGCCGT CTATGTGATG AACCCACCTG CTTACAACGT CAGCGATATG
TTTGCGCTGG CAGAACAGAT CGGCGAGTGT TATGTTGAAG CCCTTACAAA CGCTGATGCA
CGGAAGGTCG TGTTACTGTC TTCGGTTGGT TCACAGCACG CTTCCGGTAC GGGCAACATT
TTGACGACCC ATATTTTAGA GCGCATGTTG GGCAACTTGG CAGTTCCCGT CACAGTTCTG
CGAGCAGCAT CGTTTATGGA GAATTGGGGG AGTGCCGCCG CGATCGCTGC CGAACAAGGG
GTACTGCCCA GTTTTTTTGC TCCACTCGAT CGTCGGCTGC CTATGGTTTC GACCGAAGAC
ATCGGGCGCA CTGCGGCTGA AGCCATGATT GAAGACTGGA AAGGTCAGCG CATCATCGAA
CTGCATGGTC CGATCGACTA CTCACCAAAC GATGTCGCTG CTGCTTTTGC CGCTGTGCTT
AACCGTAATG TACAGGCAAT TGCTGTTCCC GAAAGCGACT GGCAAGCAAC AATTTCCAGC
TTTGGCTTTT CACCTGAAGC CGTCAACAGC TACAGCGAGA TGATGCGCGG TTTCAACTCT
GGTCATATCG TCTTTGAAAG TAGCCCAGAG ATAGAAACGC GCACCGGACA AACTGCAATA
GAAGCTGCTG TTGATAGATT GACTGGAAGC AAATCCAAGT AA
 
Protein sequence
MYVVFGATGQ TGSAVANALL ERNFPVRVVL RSDKAASTWR EKGADVAIAE VTDVEAMTAA 
MREADAVYVM NPPAYNVSDM FALAEQIGEC YVEALTNADA RKVVLLSSVG SQHASGTGNI
LTTHILERML GNLAVPVTVL RAASFMENWG SAAAIAAEQG VLPSFFAPLD RRLPMVSTED
IGRTAAEAMI EDWKGQRIIE LHGPIDYSPN DVAAAFAAVL NRNVQAIAVP ESDWQATISS
FGFSPEAVNS YSEMMRGFNS GHIVFESSPE IETRTGQTAI EAAVDRLTGS KSK