Gene Ava_C0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0052 
Symbol 
ID3678089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp82383 
End bp82994 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID637715136 
Productabortive infection protein 
Protein accessionYP_320330 
Protein GI75812713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.184729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.225056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC AGTCAGTCCG CCAAGAACGA CAGAAAGTAA TTCTGATTGT AGGTTTTACC 
TATATTTTGC CTGTTGTATT GATATTTGTG GGGTTGGTTC CTTTTTCATG GCGGTTTGCT
GTGCTGATTC TATCTGCGAT GGTGATTTTA GTGATCGCTA GACTGTACCG ATTCTCTCCT
GTAGAACTGG GATTTACTCA AAAACACTTG AGAGCTTCTC TCAAAGCGAT CGCTCTACCC
ACCTTGGCTA TTGCTCTGCT GATACTTGTT CACTATATTA CTCAAGGAAC GCGCCTCGAC
AACTCGGCAT ATAACTGGAC TTTCTACCTT TTGTTTGTGG GCGTGTCTTC TCCTGTACAG
GAGTTTTTGT ATCGCGGCTT TCTCTTTGGT ATTTTCTCTA GAGCAAAATT CCCGATCTCT
TTACAGATTT TCCTCTCGAC TTTGCTATAC AGTTGCGTTC ATCTAATTTA TCGAGATGTA
CCGACGCTGG TTCTCACATT TATTGTGGGT TTGCTGTGGG GCTGGCACTA TGCCAAGTTT
CGGAATTTAT ATACTGTCAT CCTTAGTCAC TCGCTACTTG GTGCGATCGC TATCCTGGTT
GGTCTGGTAT AA
 
Protein sequence
MKTQSVRQER QKVILIVGFT YILPVVLIFV GLVPFSWRFA VLILSAMVIL VIARLYRFSP 
VELGFTQKHL RASLKAIALP TLAIALLILV HYITQGTRLD NSAYNWTFYL LFVGVSSPVQ
EFLYRGFLFG IFSRAKFPIS LQIFLSTLLY SCVHLIYRDV PTLVLTFIVG LLWGWHYAKF
RNLYTVILSH SLLGAIAILV GLV