Gene Ava_A0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_A0004 
Symbol 
ID3677975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007411 
Strand
Start bp3684 
End bp5078 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content44% 
IMG OID637715057 
Productvon Willebrand factor, type A 
Protein accessionYP_320251 
Protein GI75812633 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG TGCTAAACGT ATCTATTACC CCTCACAGGG AATTTATGCC TGCGGAAACT 
GAGGGACAAA AGCTATTTCT GATGCTGAAA CTGCGCCCAA CAAAAGAAGT TGCAGTTTCT
CGTCCACCTA CTACCTTTGC TTTTGTCATT GATACTAGTG GTTCCATGTA TGAAATAGTT
ACAGGAGAAA CAACGCCTAC AGGTGTGACT TATACCCAAG ATGCTAAGGA ATATAGCCAG
GTGACAGGGG GTAAATCAAA AATTGATATT GTCATCGAGT CTTTGTTAGC ACTGGTGCGT
TCTGGCAGAT TAGAAGCAAG CGATCGCGTG GCGATTGTCC AGTTTGATGA TACAGCTTCC
CAGATTATTG ACTTGACCCC AGCGACGCAA GTTAGTCAAT TAGAAAATGC GATCGCTCAA
CTTCGCAGTT TTTCTGGTGG TACTCGCATG GGCTTGGGTT TGCGTCGCGC TTTAGATATG
CTTAGTGGTC AGGATATGGC TGTCCGACGT ACCCTACTGT TCACAGATGG TCAAACTTTT
GATGAAGATA TCTGTCGGGC GCTCGCATCA GATTTTGCTA CTAAAAATAT CCCGATTACC
GCCTTGGGAG TTGGTGAAGA CTTCAAAGAA GATTTACTTT CTCATCTGAG CGATTCTACA
GGTGGAACCC TATTTTATGT AGTTCCGGGA AACGCTGTTG GTACTCAAGT TTCTATTTTA
GATTTACCAA ATAGAATTAT TGCCGACTAC ATTCAGGCAC AGAAAGAAGT TATTACTAAC
TTAGCTTTAA CAGTCAAAAC TGTTAAAGGT GTAGAATTGA ACCGCATTGT TCGCGCCTAT
CCCACTCAAG CAGAATTTTC TCTTACTCAA GAATCTTATC CCATTGGCAA TGCAGCTGCC
GGTGATGAAA CAATCTTCAT CCTCGAATTC CGCATGAATA GCCGTCCTGC ATCCCGTGTC
CGGATTGCTC AACTTGGTTT AACCTACGAT ATTCCAGGAC AAAACCGACG CGGTGAACTT
CCACCCCAAA ACTTAGTAGT GCAATTTGTT GCTGGACAGG GAGGTGCAAC GCAAGTGGAT
CAAGAAGTCA TGGATTATGT ACAGCAATGC AATATTTCCA ATTTAGTCAA CCAAGCGACT
AAAATTGCTG ACCGCGACCC ACAAAAAGCC GAAGAACTAT TAGAAACTGC ACGGCGTATG
ACAGTGAGAA TTGGCAACAA AGAAATGGAA GAATCCCTCA ACGGCGCTCA ACAAGAGTTA
CGTAAAACTC GCCAGATATC TGCCGGAACC CGTAAAACTG TCAAGATGGG AGCCAAAGGT
AAAACCGTCA AAATAGGTAG CGATATTAAT GACGAGCTTT CAGAAGAAGA AATGCGTAAA
CTCACAGGAA CTTAA
 
Protein sequence
MSNVLNVSIT PHREFMPAET EGQKLFLMLK LRPTKEVAVS RPPTTFAFVI DTSGSMYEIV 
TGETTPTGVT YTQDAKEYSQ VTGGKSKIDI VIESLLALVR SGRLEASDRV AIVQFDDTAS
QIIDLTPATQ VSQLENAIAQ LRSFSGGTRM GLGLRRALDM LSGQDMAVRR TLLFTDGQTF
DEDICRALAS DFATKNIPIT ALGVGEDFKE DLLSHLSDST GGTLFYVVPG NAVGTQVSIL
DLPNRIIADY IQAQKEVITN LALTVKTVKG VELNRIVRAY PTQAEFSLTQ ESYPIGNAAA
GDETIFILEF RMNSRPASRV RIAQLGLTYD IPGQNRRGEL PPQNLVVQFV AGQGGATQVD
QEVMDYVQQC NISNLVNQAT KIADRDPQKA EELLETARRM TVRIGNKEME ESLNGAQQEL
RKTRQISAGT RKTVKMGAKG KTVKIGSDIN DELSEEEMRK LTGT