Gene Ava_B0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0330 
Symbol 
ID3677720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp354562 
End bp355323 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content50% 
IMG OID637715035 
ProductC-5 cytosine-specific DNA methylase 
Protein accessionYP_320229 
Protein GI75812610 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0129199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG TCCTCTCCTT ATTCTCCGGC ATCGGCGGAC TGTGCCATCA CGGTATCGCT 
GCGGCGGGTC TATCTCACAA GTTTCAAGTA AGGCAATTTG TCGAAATATC CCCCTATTCA
CAATCGGTAC TGCGTTATGA ACAGCCCCAA ACCCCAATCC ACTCGGACAT TACCACCTAC
CACTGCAACA GGGGACAGTT TGACATCTTG TGTGGGGGAT TCCCTTGCGC CGGCACAAGT
AACTCTGGCA ACCGACAAGG ACTCTCTGAC CCCAGATCCG CGCTCTGGGC TGAACAGTTC
CGCATCATTG AATCCGATAG ACCAGCGATC GCTCTTATCG AAAACCCCAC AGGTTTGCTC
TATCGCGGAC TTGAGCAAAT CATCTATGAC TTTGACAGCA TCGGGTACAT GGGCGAATGG
AACTGTATCT CTGCACAACA AGTCGGCTTG TCGCACCAAA GGAAACGAAT CTTTATCATT
GCCTACCCCG ATGGCCTATT CAACCGTCAA CAGCAGGCCC CCTGGACAAA CCAAATTGGA
AATCACATTA CGCAAGTACG GCTCTCTCTC GAAACAAGAA GCTATCAACC CGGAGTTCTT
GCGGTGGCTC ATGGGATTCC CATTGGAGTA GCTAAAAACA TCTCTGGTAA CTATGATGCC
CGTCGTGCTT ACGGGTTGAG TTGCTCTCCG CGACAGTCCG CCGTTGCTTG GAAACGCATT
GATTATCTAT GCAGTTTACT TTCTTATCAG GAGGCATTTT GA
 
Protein sequence
MKSVLSLFSG IGGLCHHGIA AAGLSHKFQV RQFVEISPYS QSVLRYEQPQ TPIHSDITTY 
HCNRGQFDIL CGGFPCAGTS NSGNRQGLSD PRSALWAEQF RIIESDRPAI ALIENPTGLL
YRGLEQIIYD FDSIGYMGEW NCISAQQVGL SHQRKRIFII AYPDGLFNRQ QQAPWTNQIG
NHITQVRLSL ETRSYQPGVL AVAHGIPIGV AKNISGNYDA RRAYGLSCSP RQSAVAWKRI
DYLCSLLSYQ EAF