| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0238 |
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| Symbol | |
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| ID | 3677706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | - |
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| Start bp | 266582 |
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| End bp | 269758 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637714944 |
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| Product | lanthionine synthetase C-like |
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| Protein accession | YP_320138 |
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| Protein GI | 75812519 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4403] Lantibiotic modifying enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0581031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTAACTATGA GGATGCCACT TGGTATCGTG CAGTATCACT AACAGAAAGA
ATTGCAGCTA TGTCGCTAAC AGCACCATTA AATGCTGATT TGGGGCAGCG ACGATTCCAG
CGATGGCGGA TGCAATCTCC TTTCATGAAT GAGGCTTTGT TTGTCCAAAG ATTAGCAATA
GATGGTTTGA AGGTAGATGA TTTTTGTTAC CTATTAGGGC AAACAGCACC GCAAATTCCA
CAAGCTTGGT TAGGGAAATT GACGGCAGTT TTCAGTAATC CTGAGGATGA GGAGATTATA
GAAATACAAG GTTTGCCCGA TCCTCATCTG GGATTGCTAA ATGCGATCGC TCCCTGCATT
CGTCAAGGTA TGATGCAACT GAGGGTAGGG GTTGATAATC TACAAAATAT ACCTATTGAT
ATTAGTAATA TTGACAGTAT TTTTTTACAA GGCTTACCAG AACAACTATT ATTCATGCTC
CATCCCACCT TGGTACTAGA ACTCAACGTG GCGAGGTTAC AAGGATTATT AACAGGTGAT
ACTGCCGAGG AGAGATTTTC TAGCTTTGTG CAACGGTTGC AAACGGGGGA AGCGAGGCTC
ATGCTTTGGC AAGAGTACCC TGTGTTAGCA CGGCTAATTA TAGAAGAAAT TCAGCGATGG
GTGACAACTA GCTTGGAGTT TCTGCAACGT CTTGGCGATG ATTGGGAAGA AATATGTCAC
CACTTCCAGC CAAACAACCC CGGTAAACTG ATCAAAATTC AACGGGGTGC AGGAGATAGT
CATCATGGTG GTAGGTCTGT TTTTATACTG GAATTTGAGA GTGGTTGGCA GTTAGTTTAT
AAGCCTCGTT CCCTAGCTGT AGATGAGCAT TTTCAAGAAT TACTACTTTG GTTAAATCAA
CAAGGCACTC ATCCCCCGTT TAAAACCCTA AAAATTCTCA ATCGGGGTGA TTATGGTTGG
ATGGAATTTG TCAAAGCGCA AAAATGTACT TCCTTGGAGG AAATTCAGCG TTTTTATCAG
CGTCAAGGTG GTTACTTAGC CTTGTTATAT GTTTTATCAG CTACAGACTT TCACTTTGAA
AACTTAATTG CTGTCGGCGA ACACCCCATA CTGATTGATT TAGAATCTTT ATTTCATCCC
CGCAGCCATG AAGCCACAAC CACAGCCGCC GCTACCTTAG ATAGAGAAAT GATTGCAGAT
TCCGTATTGC GGGTAGGTTT ATTACCTCAG TTAGTCTGGG GAAATACCCA AGCAGCCGGC
ATTGATTTGA GTGGCTTGGG TGGTGCGGCT GGACAAGTGA CACCAGAACG AGTCCCCCAG
TTGGAGAAAA TCGGTACTGA TACCATGCGA ATTGTCCGCC GACAGGTGGT ATTAGCAGGT
AGTCAAAATC GCCCCACACT CAACGAAAAG GAGGTGAATG TACAAGCCTA TACACCAGCT
ATTACCCAAG GATTTACAGA TGTTTACCGC ACCCTTTTAC AACATCGTCA AGAATTGCTG
AAGATATTAG AGAGATTTGT AGCTGATGAG GTGCGTGTAG TGCTGCGTCC GAGTCGAAGT
TATGCTTTAC TACTGCGGGA AAGCTATCAC CCTGATGTGT TGCGCGATGC CTTAGAGCGC
GATCGCCTGT TTGATAAACT GTGGGTAGAC GTACAAAATC GACCTCTTCT TACTCAAGTC
ATTAGGGCAG AACATCAAGC ATTATGGCAA GGTGATATTC CCTTATTTAC CACCCATCCC
CATTCCTGTG ATTTATGGAG TCGAGACACT AACTTACATT TGCCCAATTT TTTCACCCAG
TCGGGAATGG AATTAGTTCA CCATCGCATT CAACAACTGA GTGAACGTGA CTTACAACGT
CAGCAATGGT TTATTCAGTC AGCTTTGGCT ACATTGGGGA TAAATACTAA TACTGATCAA
CATCAAGTCA AACACTCAGC TAGTATTAGT AACTCCCAAA TTCCCACCCC CCACTCACCA
CTCACAGCAG CTTGTATAAT TGCTGACCGT CTAGAACTCC TCGCCCATAA AAACGGTGAA
TTGATTAACT GGATGGGTGT CACCGTCACC AACAATCATC AATGGACATT AGCCCCCTTG
GGAACAGATT TTTATGAAGG TGTACCAGGA ATAGCTTTTT TCTTGGCTTA TTTAGGAGAA
ATTACCCAAA ATTATCACTA TACCCGCCTA GCAAAAGCCG CCATCAAAAC TTTACAACAG
CAGTTGATTA GAGATACCGA CACAATCAAA TTCATCGGCG CATTTAGTGG CTGGGGAGGA
ATTATTTACA CCTACACTCA CTTAGGCACA CTCTGGCAAA ATCCCGATTT AATTGCTGAT
GCACTTACCT TAGTAAAAAA ACTTCCTGGC TTGATAGTCC AAGATGAACA GTTAGATATG
ATCGCAGGTG TAGCTGGTTG CATTGCTAGC TTGTTAAGTT TATACCAAGT TTTTCCCAAT
GACTTAATTT TAGATGTCGC CTTGGAGTGT GGAGAACATC TGCTTAACCA AGCCCAAATC
ATGGATGATG GAATCGGCTG GATTTCTCCC AGTGGTGGAA AGCAACCCCT CACAGGATTT
GCTCATGGTG CGGCTGGGTT TGCGTCGGTA CTGTTAGAAT TAGCCCAAAT TACTGGAAAA
CAAGAATTTC AAACCGCAGC TATCAAAGCA ATTAACTACG AACGCAGACA TTTTTCCCCA
GAGGCGGGGA ACTGGCTAGA CTTACGCACC CCCGCACAAA ACCAATTTAT GACAGCGTGG
TGTCATGGTG CGCCAGGGAT TGGCTTAGGA CGCTGGCGTG CCTTAAAATA CCTAGATGAT
CCAGAAATTC ACAAAGAAAT TGCGATCGCC ATTCACACAA CTATCAACCA AGGATTTGGG
GATAATCAAT GTCTGTGTCA CGGAGACTTA GGCAACCTAG ACCTATTATT ACTCGCCAGC
AAAATCCAGC CAGAACTCAC ATCCCACACA TCCCCCATCA CCAACCAAAT TCTAAATCAA
ATCCACCAAC ATAACTTTTA TTGTGGCGTA CCCCTAGCCA TAGAAACCCC AGGACTCATG
ACAGGACTAG CAGGTATAGG CTACGGATGC TTACGCCTAG ACCATCCTGA AAAAATCCCC
TCCATCCTCC TCCTAGAACC CCCTCATACC AATTCAAAAT TCAAAATTCA AAATTAA
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| Protein sequence | MKKFNYEDAT WYRAVSLTER IAAMSLTAPL NADLGQRRFQ RWRMQSPFMN EALFVQRLAI
DGLKVDDFCY LLGQTAPQIP QAWLGKLTAV FSNPEDEEII EIQGLPDPHL GLLNAIAPCI
RQGMMQLRVG VDNLQNIPID ISNIDSIFLQ GLPEQLLFML HPTLVLELNV ARLQGLLTGD
TAEERFSSFV QRLQTGEARL MLWQEYPVLA RLIIEEIQRW VTTSLEFLQR LGDDWEEICH
HFQPNNPGKL IKIQRGAGDS HHGGRSVFIL EFESGWQLVY KPRSLAVDEH FQELLLWLNQ
QGTHPPFKTL KILNRGDYGW MEFVKAQKCT SLEEIQRFYQ RQGGYLALLY VLSATDFHFE
NLIAVGEHPI LIDLESLFHP RSHEATTTAA ATLDREMIAD SVLRVGLLPQ LVWGNTQAAG
IDLSGLGGAA GQVTPERVPQ LEKIGTDTMR IVRRQVVLAG SQNRPTLNEK EVNVQAYTPA
ITQGFTDVYR TLLQHRQELL KILERFVADE VRVVLRPSRS YALLLRESYH PDVLRDALER
DRLFDKLWVD VQNRPLLTQV IRAEHQALWQ GDIPLFTTHP HSCDLWSRDT NLHLPNFFTQ
SGMELVHHRI QQLSERDLQR QQWFIQSALA TLGINTNTDQ HQVKHSASIS NSQIPTPHSP
LTAACIIADR LELLAHKNGE LINWMGVTVT NNHQWTLAPL GTDFYEGVPG IAFFLAYLGE
ITQNYHYTRL AKAAIKTLQQ QLIRDTDTIK FIGAFSGWGG IIYTYTHLGT LWQNPDLIAD
ALTLVKKLPG LIVQDEQLDM IAGVAGCIAS LLSLYQVFPN DLILDVALEC GEHLLNQAQI
MDDGIGWISP SGGKQPLTGF AHGAAGFASV LLELAQITGK QEFQTAAIKA INYERRHFSP
EAGNWLDLRT PAQNQFMTAW CHGAPGIGLG RWRALKYLDD PEIHKEIAIA IHTTINQGFG
DNQCLCHGDL GNLDLLLLAS KIQPELTSHT SPITNQILNQ IHQHNFYCGV PLAIETPGLM
TGLAGIGYGC LRLDHPEKIP SILLLEPPHT NSKFKIQN
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