Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0235 |
Symbol | |
ID | 3677703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 262414 |
End bp | 263916 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637714941 |
Product | secretion protein HlyD |
Protein accession | YP_320135 |
Protein GI | 75812516 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGAAC TCAAAAATTT TAGTCCTAAT TTTCTTCCTA GTGCAAAATC CGATGAATAC CTACCTCAAA TTGGTATTTG GACGCGACTA GGAGGATTTT TTCTTGTGGG TGTGGTGGGT ATGGCTGTGA GTGTCGCAGC TTTGACAAGA TATCATCAAA CAGTGAAAGC ACCTGGAACT GTGCGTCCGA CTGGAGAATT ACGTATAGTT CAAACAGCAA TAGCAGGAAC GGTGAAAAAA ACTTTTGTCA GAGAAAATCA GTTGGTTAAC CAAGGTGAAT CTTTAGTAAT TCTTGATGAT ACTCAACTAC AAACTAAAAA AAGTCAACTA CAAGGAAATA TTCAAAAATC TCAGCAACAA CTTCACCAAA TAAATGCTCA AATTCTCGCT TTAGATCAGC AAATTACCAC AGAAAATCAG CGTGGTGAAC GTGTGATTTC CTCAGCTAAG GCTGAACTCA ACTTGACACA AAGAGAGTAT GCAGATAAAC AAATTGCGGT GAGTAGTGAA TGGCAAGAAG CTGAGGCTAA TCTGAAAATT GCTCAAAATG AATTGCAGCG ATCGCAAGCT GATTTAAAAT CCATTCAAGC TAATCTCAAA AGTGCAGAGG CTGCATATCA AGCGGCAATT GTCAAGCACG ATCGCTATCA AATTATCGCC CAATCTGGCT CTATTTCCCA AAACCAACTA GAAGAAGTAC AACTAGCAGC AACACAACAA GCACAAGTTT TAGAATCCCA AAAAGCCGCC GTAGAAAGTC AAAAACAAGT CATTCAGCAA AAACAGCAAG CTTTAACAGC CGCAGTAGCC AACCGGGTGA AAGCCTCCTC AGCATTAAAC CCCAGTGATG CAGTGATGAC AATTGCTCAA GAAAAAATTG CCACTGAACA GGCTAGTAAA CAAAATAATT TAGCTCGTTT ACGCCAAGAA AAAGAGAGTT TATTACAGCG TCAAACGGAA ATTCAAGACA CAATTAATAA TACAAAAAAA GAACTGAAAC AGATTTTAGC TGATATTCAA AAAACTATCA TTCGGGCTTC AGCTACAGGC AATATTTTTA AGTTAGAATT GCGAAACCCC GGACAAGTTG TAGAATTGGG ACAGGCGATC GCTCAGATCG CCCCCAACAA TAAGCCTTTA ATCATTAAAG CCCGTGTAGC ATCTGCTGAC ATTGGTAAAG TACAGATTTG TCGATTAGAA AAAATTGCAG ATTGTCAACA AGGTAAAGTA AATATCCAAT TTTCTGCTTA TCCCTATCCT GATTACGGCA CACTTAAAGG TGCAGTGAGA GAAATTACTG CCGATGCAAT TACTACAGCA AATAACTCAT CAATACCTGC CTATTATGAT GCGACAATTG AACCAGAAGT AAATTACTTA CAAAAAAATT CGCAAAAGTA TCATGTTCAA GCAGGTATGG AAGTCACAAC AGACATCCTA GCTCAAGAAG AAACTCTGTT AACATTCATA CTCAGGAAAA CTAGATTACT GACTAATTTA TAG
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Protein sequence | MVELKNFSPN FLPSAKSDEY LPQIGIWTRL GGFFLVGVVG MAVSVAALTR YHQTVKAPGT VRPTGELRIV QTAIAGTVKK TFVRENQLVN QGESLVILDD TQLQTKKSQL QGNIQKSQQQ LHQINAQILA LDQQITTENQ RGERVISSAK AELNLTQREY ADKQIAVSSE WQEAEANLKI AQNELQRSQA DLKSIQANLK SAEAAYQAAI VKHDRYQIIA QSGSISQNQL EEVQLAATQQ AQVLESQKAA VESQKQVIQQ KQQALTAAVA NRVKASSALN PSDAVMTIAQ EKIATEQASK QNNLARLRQE KESLLQRQTE IQDTINNTKK ELKQILADIQ KTIIRASATG NIFKLELRNP GQVVELGQAI AQIAPNNKPL IIKARVASAD IGKVQICRLE KIADCQQGKV NIQFSAYPYP DYGTLKGAVR EITADAITTA NNSSIPAYYD ATIEPEVNYL QKNSQKYHVQ AGMEVTTDIL AQEETLLTFI LRKTRLLTNL
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