Gene Ava_B0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0173 
Symbol 
ID3677901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp193822 
End bp194835 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content38% 
IMG OID637714880 
Productcytochrome bd ubiquinol oxidase, subunit II 
Protein accessionYP_320074 
Protein GI75812455 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.409377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAT TGGAACAAAT ATTACCGATA GTTTGGTTTG GTATTATTGC CTTATTTCTC 
TCCATTTATT TGATTACTGA TGGTTTTGAT TTAGGAGTGG GAATTTTAAC TTTAAGGCGG
AAGGATGAGG AAGAAAAAGG CATTTTGATT AACACTTTAA GTAGTGTTTG GGATGCTAAT
GAAACTTGGC TAGTGTGTAC TGGAGGGGCT TTATTTGGGG CTTTTCCTCT GGCTTATGCG
ACAATTGTCA ATGCCCTGTA TATTCCAATT AGCTGCATGG TAATTGGATT TATTTTGCGG
GCGGTTGCAT TTGAATTTCG AGAACATTCC CACAATAAAA CTTTTTGGAG TATTGCCTTC
GGCGGTGGTA GTTTATTAGC TACATTATCC CAAGGATTAA TTCTGGGTGG GGTTTTAGCT
GGAATCAAAG TTGATAGTAC AGGTGCGTTT ATTGGTGGAA TTTGGGATTG GTTAAATTTG
CCATCAATTC TAGTAGCTTT AACTGTCATG CAAGGCTATG TGATGATTGG TGCAACCTAT
CTAATTATCA AGACAGAAGG TGAACTACAA AAAACCTACT ATCGCACAGC TATATTATCA
ACTTGGGCGA CAGTTATCGG GGCAATTTTG ATTACTGCTG CTGTTCCAGT GTTCTATGAA
AATATACGCG ATCGCTTGTT TCATCAACCA GAAGTATTTA TCTTTGCGTT AATTCCTATA
CTGGCTCTTT TAGCAGTTAG CCGATTAATT TACAGCATCA ATGCTCGTCA GGAGATGACA
CCTTTTATTT GGGCAGTTGT GGTATTCTTA ATTACAACTG TAGGTTTAGC TTTTGTCGTC
TTTCCTTACA TTATTCCCAC CCAAATCACC ATTTTTGAGG CAGCTTCTTC CTTTAGTTCT
CAAGTTTTGA TGATTACCTT CATTGGCTTT TTTGTACCGA TTATGCTTTT CTACAATGCC
TATCTATATA GGGTATTTCG GGGCAAAGTA GTTAGTAGTT ATTATGGGGA ATAA
 
Protein sequence
MDTLEQILPI VWFGIIALFL SIYLITDGFD LGVGILTLRR KDEEEKGILI NTLSSVWDAN 
ETWLVCTGGA LFGAFPLAYA TIVNALYIPI SCMVIGFILR AVAFEFREHS HNKTFWSIAF
GGGSLLATLS QGLILGGVLA GIKVDSTGAF IGGIWDWLNL PSILVALTVM QGYVMIGATY
LIIKTEGELQ KTYYRTAILS TWATVIGAIL ITAAVPVFYE NIRDRLFHQP EVFIFALIPI
LALLAVSRLI YSINARQEMT PFIWAVVVFL ITTVGLAFVV FPYIIPTQIT IFEAASSFSS
QVLMITFIGF FVPIMLFYNA YLYRVFRGKV VSSYYGE