Gene Nwi_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3111 
Symbol 
ID3677324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3369761 
End bp3370135 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID637714676 
ProductXRE family transcriptional regulator 
Protein accessionYP_319710 
Protein GI75677289 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA CTTTGATCGT TATCCAGAAC CAGGCCGATC ATGAGGCGGC CAAGGCCCTT 
GTCGGCAAGC TGATCCAATC AAGCGATGCC GCCGATCGTG CGCGCATGGT GGCGCAATCG
CGCCTTATCG AAGCCTATGA ACGTACACGC TGGCCGCGCA AAGCGCCGCC ATTGCCTGAT
TTGCTGAGCT ATCTGGTGGA GCAACATGGT TTGACGCGTG CCGATCTTGT GCCGCTTCTG
GGCACGGCGA GCCGCGTTAG CGAAGTGATG TCCGGCAAGC GCGAATTGAG CATGACGATG
GTGAAGCGTC TGCGCGAACG TTTCCATATT CCTGCCGACT TGCTGATTTC GGCAAGCGAG
AGTGTCGCAG CCTAG
 
Protein sequence
MKATLIVIQN QADHEAAKAL VGKLIQSSDA ADRARMVAQS RLIEAYERTR WPRKAPPLPD 
LLSYLVEQHG LTRADLVPLL GTASRVSEVM SGKRELSMTM VKRLRERFHI PADLLISASE
SVAA