Gene Nwi_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3048 
Symbol 
ID3676357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3309230 
End bp3310306 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID637714614 
ProductABC-type Fe3+-siderophore transport system permease component 
Protein accessionYP_319649 
Protein GI75677228 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGCC GGACAGGCCG GACCGGCGGT TCGCCCTGCT TTCGAGGTCA CATGGTGATC 
GCGCCCGCCG CCGGCCGCCA GCGCATGATC GTGACGCTGG CGTTGTGTGC GGGTGTCGCG
GCCTTGACGC TGGTGTCACT GGGAATAGGA CCCGTGGCGC TGTCACCGAC AACGATCCTC
CATGCCTTGT TTGGTGGCGG CGGCGACGTT CAGCGGATCA TCGTGCTGGA GATCCGTTTG
CCGCGCGCGA TCCTCGCGAT CGTCATCGGC GGAATTCTCG GTTTATCGGG CGCCGCCCTG
CAGGGACTCG TGCGCAATCC CCTGGCGTCG CCGTCGTTGT TCGGCGCGCC GCAGGCGGCC
GCGTTCGGCG CGGTGCTGCT GATCGCGCTG GGATGGGCCG ACATTCATTC CTTCGCCTTG
CCGGTGGCGG CGATCCTGGC GGCGTTCACT TCAGTGTTCG TGCTGCTCGT GATCGCGGGG
CGTGACACCA GCCTCTTGAT CCTGATCCTC GCCGGGCTGG CGATCTCCGC TCTTGCCGGC
GCGGCGACGT CGCTGACCAT GAACCTTTCA AGCAACCCTT TCGCGGCGCT GGAGATTGCA
TTCTGGCTGC TGGGGTCGCT GGAAGACCGC AGCTTTCGGC ATGTGGCGCT GGCGCTGCCG
TTCATCGCCG CGGGAGCTGC GACGCTGATG AGCCAGCGTC ATGCGTTTCG CACGCTCAGC
CTCGGTGAGG AGGCCGCGCT CAGCCTGGGA GTCAATGTCG GCCGGCTTCG GCTATGGACG
ATCCTCGGCG TTGCGCTTGG GATTGGCGGC GCGGTTGCGG TGTCAGGCGC CATCGGCTTC
ATCGGGCTGG TGGCCCCGCA TCTGATGCGT CCTCTGATTG GCTACGACCC CTCACGGCTG
CTGGTGCCGA GCGCGCTGAC CGGCGCTGTG CTCCTGCTCG CAGCCGATAT CGCGGTGCGT
GTCATTCCTT CGACCTCGGA TATCAAGGTC GGCGTCCTGA CCGCGTTGAT CGGCGTACCG
TTCTTCCTCT ATTTGATCGT GCGCGAGCGG CGGGCTCTGG GTGGAGGGGT GGCATGA
 
Protein sequence
MGRRTGRTGG SPCFRGHMVI APAAGRQRMI VTLALCAGVA ALTLVSLGIG PVALSPTTIL 
HALFGGGGDV QRIIVLEIRL PRAILAIVIG GILGLSGAAL QGLVRNPLAS PSLFGAPQAA
AFGAVLLIAL GWADIHSFAL PVAAILAAFT SVFVLLVIAG RDTSLLILIL AGLAISALAG
AATSLTMNLS SNPFAALEIA FWLLGSLEDR SFRHVALALP FIAAGAATLM SQRHAFRTLS
LGEEAALSLG VNVGRLRLWT ILGVALGIGG AVAVSGAIGF IGLVAPHLMR PLIGYDPSRL
LVPSALTGAV LLLAADIAVR VIPSTSDIKV GVLTALIGVP FFLYLIVRER RALGGGVA