| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3039 |
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| Symbol | |
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| ID | 3676348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3293456 |
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| End bp | 3294361 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637714606 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_319641 |
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| Protein GI | 75677220 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA AATTGCTGGG AGGTCGCCAC ATTGCAACGC GGGGTCTCGC GCTCGCCGCT
GTATGGGTGA CAGCCCTCGT CGCTCCTGCG GGGGTGTTGG CGGACGAACA GGATATCCCG
AACGCCGCCG CTGTCAGCGT CCTGAAAGCC ACAAGGTTCT GCTTCTCGGC GAGCGTTCAG
GTCACGGGGA TACTGATCCC GAGGAACGAG ACGGCGGTGC GGCCGGAGCG GCCGGGCTTG
AAGGTCGCCG AGATCCTCGC GGAGCCGGGA CAGAGCGTGA CCGCCGGGCA GGCGCTTGCC
CGACTGACGC GCCCCGAAGG CGGAACGACC CAGATTTCGT CCCCGGTGGC CGGGTTGGTC
AGCCGCTCGT CCGCCGGGAT CGGAGCGGTG GCGTCGGGCA AGGGCGAGGC GCTGTTCAGT
ATCGTCACCG GCAACGAGTT CGATCTGGTG GGGCAGGTGC CGAGCGGCGA TCTGGCGAAA
CTCGCGGTCG GTCAGGCCGC TAAAGTCATG GCGGTCGGGG CCGATGAAAT GGACGGCAAG
GTCCGGCTGA TCGCGCCGAC GGTCGAACCG AACAGCCAGC TCGGGCAGGT CTTCATCTCC
GTCGATCCCA GCAAGCACCT GTTGGTCAAT GCGTTTGGCC GCGCCATCAT CAAGACCGGC
GAAAGCTGCG GCATCGCGGT GCCGTTGACG GCGATCCTGT ATGGGAGCGC GGGCGCGGTG
GTTCAGGTGG TCCGGCGCCA GCGGGTTGAA ACGCGGCACG TCGAGGTCGG ATTGCTGTCA
GGAGGACAGG TTGAGATCCG GGAGGGGCTG TCGGAAGGCG ACGTCGTGGT GGCGCGTGCC
GGCGCCTTGC TGCGCGAAGG CGATCCGGTC AGGCCGATCG CCCTGGAAGA GAGCGCGGCC
CGTTAG
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| Protein sequence | MSTKLLGGRH IATRGLALAA VWVTALVAPA GVLADEQDIP NAAAVSVLKA TRFCFSASVQ
VTGILIPRNE TAVRPERPGL KVAEILAEPG QSVTAGQALA RLTRPEGGTT QISSPVAGLV
SRSSAGIGAV ASGKGEALFS IVTGNEFDLV GQVPSGDLAK LAVGQAAKVM AVGADEMDGK
VRLIAPTVEP NSQLGQVFIS VDPSKHLLVN AFGRAIIKTG ESCGIAVPLT AILYGSAGAV
VQVVRRQRVE TRHVEVGLLS GGQVEIREGL SEGDVVVARA GALLREGDPV RPIALEESAA
R
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