| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3030 |
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| Symbol | |
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| ID | 3676400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 3281173 |
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| End bp | 3282093 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637714597 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_319632 |
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| Protein GI | 75677211 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0446257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGAC TTTCGGATAC TTTTGGGCCG CGATGCGCGC GTAAGCTCGT CTCCGGCCTG
CTTCTTGGCG TGGCGGTGGC GGCCCTTGGG GTGATGGGCC CTTCGCTCGC CGCCGATGAC
ACCGAGCCGT CCGCCGGCGC CCTCGTAACC GTCGCCCGCG CCACCAATGC CTGCTTTTCC
GAGATGGTTC GTGTGACCGG TTTTATTGTC GCGCGCCAGG AGGCGGTGGC CGGCCCCGAC
TCGGAAGGAT CGCTTGTCAC CGACGTGCTG GTCCGCGAGG GCGACACTGT CGCGCTGAAT
CAGGAACTCG CCCGGCTGAC GCCTCCGCCC GGCGGCAAAT CGGGATCGAC CCTGCGCGCG
CCCGCCGCCG GCCTTGTCAC CCAGGTCCGC ACCGCCGTCG GAGCGCCGGC CTCGCCGCAG
GCCGGACCGA TGTTTCGGAT CGCCGTCAAC AATGAGATCG AGCTGGACGC CGAGGTTCCT
TCGATCCATG TGCTCAAGCT CAATCCAGGC GCGAGCGCGC GGGTCAGTCG TGAGGACGGC
CCCGATCTGG TCGGGCGCGT CCGGCTGGTC TCGCCCGAGA TCGATCGCAA GACCCAGATG
GGCCATGTCC GGCTGTCCCT GAGCGCGGAC CCGAGCTTGA GGATCGGCAT GTTCGCCCGC
GCCAGCATCG ACGCCAAGCG CAGTTGCGGC GTGGCAATTC CCCGCTCCGC GATCGACCAC
CTGACGGTTC AGGTGGTGAA AGGAGATATC GTGGAGAAGC GGCGCGTCCG CATCGGATTG
ACCTCCGACA CCGCCGTCGA AATCCTCGAA GGACTGAAAG CCGGAGAAAC CGTCGTGGCC
GACGCCGGCA CCTCGCTGCA TGACGGCGAT CGGGTCAAGG CCATATTCAC AGATGACCTC
GATCGATCGC GAGTACATTG A
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| Protein sequence | MRRLSDTFGP RCARKLVSGL LLGVAVAALG VMGPSLAADD TEPSAGALVT VARATNACFS
EMVRVTGFIV ARQEAVAGPD SEGSLVTDVL VREGDTVALN QELARLTPPP GGKSGSTLRA
PAAGLVTQVR TAVGAPASPQ AGPMFRIAVN NEIELDAEVP SIHVLKLNPG ASARVSREDG
PDLVGRVRLV SPEIDRKTQM GHVRLSLSAD PSLRIGMFAR ASIDAKRSCG VAIPRSAIDH
LTVQVVKGDI VEKRRVRIGL TSDTAVEILE GLKAGETVVA DAGTSLHDGD RVKAIFTDDL
DRSRVH
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