Gene Nwi_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3006 
Symbol 
ID3675033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3254250 
End bp3255068 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content60% 
IMG OID637714572 
Productformate/nitrite transporter 
Protein accessionYP_319608 
Protein GI75677187 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT ATGCGAACGC CAGCGTTGTG ATCGAAACGG TGCCGCCGTC CGATATGGGC 
GCGGCGATCG CGGCGGACGC CGCAAAAAAA GCCAAGTACG GCACCATTCA CCTACTCATT
CGCGGCTTCT TGTGCACACC CTTTCTGGCT TATGGCGCCA GCGTCGTCTT CGCCATGGTT
GCGGCGGGCA TACCGCTCGC GGTAGCCGGA CTTGTCTTCC CGGCGGGATA CATCACGCTG
AGCTTCCTCG GCCTGGAGAT GGCGACCGGC AGCTTCGCCA CGATGCCGAT CGGCATGTAC
GCCGGAACGA TCACTCCGCT TCAGCTCGTT CGCAACTGGT TCTGGACCCT CGGCGGCAAC
CTGCTCGGAG GCATATTCTT CGGCTGGCTG CTGTGGTTCT CACTAACCAA GGGTGGCGCC
ATCGAGCCGG ACAAGATGCT CCAGGTCATC GCACGCACCG CCGAGCACAA GGTCGAGTAT
ATTCATTACG GTCTCATTGG TTGGTGCGCA GCGATCGGCA AGGGCGTCCT TTGTAACTGG
CTTGTCAGCC TCGGGTCCGT GATGTCCAAA GCCACCCGCA GCACAGTCGG CCGGGTCGTG
CTGATGTGGA TACCGATCGG AATGTTCTTT GCGCTGGGAT TCGAGCACAC CGTGGTCAAC
ATGTGGTTGT TCCCGACCGC CATTCTCTCG GGCGCCAACG TGTCCATCTA CGAGTGGTGG
GTGTGGAATC AGATCCCGGT CACGATCGGC AATATTCTGG GAGCGATGGT CCTCAACGGC
ACGCTGTGGT ACTTCACGCA CACCCTGCAG AAAGACTAA
 
Protein sequence
MADYANASVV IETVPPSDMG AAIAADAAKK AKYGTIHLLI RGFLCTPFLA YGASVVFAMV 
AAGIPLAVAG LVFPAGYITL SFLGLEMATG SFATMPIGMY AGTITPLQLV RNWFWTLGGN
LLGGIFFGWL LWFSLTKGGA IEPDKMLQVI ARTAEHKVEY IHYGLIGWCA AIGKGVLCNW
LVSLGSVMSK ATRSTVGRVV LMWIPIGMFF ALGFEHTVVN MWLFPTAILS GANVSIYEWW
VWNQIPVTIG NILGAMVLNG TLWYFTHTLQ KD