Gene Nwi_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2906 
Symbol 
ID3675575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3142064 
End bp3142708 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content56% 
IMG OID637714471 
Producthypothetical protein 
Protein accessionYP_319508 
Protein GI75677087 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.162996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGA TCCGGTCGAT CATTTGTCTT GCGCTTCTTT TCCTTGCGGG CACGCTGATG 
TCCGCCAGTG CTCATCCGCA TGTCTGGGTC ACCATCCGCA GCGAAATTCT CTACACACCG
GACGGTGTGA TGAGCGGAAT CCGTCACGCA TGGACGTTCG ACGATATGTT CTCCGCCTAT
GCCTTGCAGG GCATCCATCA TGCGACAAAG GGACAATATA CGCGCGAGGA ACTGAACGCC
CTCGCGGAGG TGAACGTGAC ATCTCTCAAG GAGAATGACT ATTTCACCTA CGCGAAGGCT
GACGGGAAGA AAGCGACGTT TTCCGATCCC GTTGATTACT GGCTTGAATA CAAGGATTCG
GCCTTGATCC TGCACTTTAC GCTGCCGCTG AAGACGCCTG TTGCCGCCAA GGCGATGCTG
ATCGAGGTGT ATGATCCGAC GATCTTCGTC GATTTCGGGC TCGCGAAGGA TCAGCCTGTC
GCTTTGGCCG GAGCGCCCGC AAGCTGCCAG CTGATCGTCG ATAGCCCTCG CACGCCGACC
GCCGACGAGC AGCTTCGGAT GAGCCAGCTC GATCAAAACC CGCTCGATTC CCTTGATACT
TTCGGACAGG GTTTTTCCAA CAAGATCCGC ATCAAGTGTC CATGA
 
Protein sequence
MSRIRSIICL ALLFLAGTLM SASAHPHVWV TIRSEILYTP DGVMSGIRHA WTFDDMFSAY 
ALQGIHHATK GQYTREELNA LAEVNVTSLK ENDYFTYAKA DGKKATFSDP VDYWLEYKDS
ALILHFTLPL KTPVAAKAML IEVYDPTIFV DFGLAKDQPV ALAGAPASCQ LIVDSPRTPT
ADEQLRMSQL DQNPLDSLDT FGQGFSNKIR IKCP