Gene Nwi_2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2734 
Symbol 
ID3676328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2967933 
End bp2969918 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content64% 
IMG OID637714301 
Producttransketolase 
Protein accessionYP_319339 
Protein GI75676918 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.784208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG TCGACTCCTC CCGTATGGCA AATGCAATCC GCGCGCTCGC GATGGATGGT 
GTAGAAAAAG CAAAATCGGG CCATCCCGGC CTGCCCATGG GCACGGCCGA CATCGCCACG
GTGCTGTTCA CCAAGTTCCT GAAATACGAC GCCGCCGATC CGCACTGGCC GGACCGGGAC
CGCTTCATTC TTTCGGCCGG CCACGGCTCA ATGCTGCTTT ATGCGTTGTT ATACCTGACC
GGCTACAAGC AGATGACGCT CGATCAGCTC AAGAATTTCC GGCAGCTCGA CTCCAAGACG
CCGGGTCATC CGGAGAACTT CATCACCGAG GGCGCGGAAA CCACCACAGG CCCGCTCGGC
CAGGGTGTCG CCACCTCGGT CGGCTTCGCG CTGGCGGAAC GGCTGCTGGC CGCCGAATTC
GGCGGCGAGG TGGTCGACCA CTACACTTAC GTGCTGTGCT CCGACGGCGA CCTGATGGAG
GGCATCAGCC ATGAGGCGAT CGCGCTGGCG GGTCACCTCA AGCTCAACAA GCTGATTTTC
CTTTACGATG ACAACGGCAT CACCATTGAC GGCCCGATCT CGCTGGCCGA CGACGTCGAT
CAGGTGGCGC GTTTCAAGGC GTGCGGCTGG GACGCAAGGC GGATCGACGG CCATGATCAG
AAGGCAATCG CCGCCGCGAT CCGCCGGGCG CAGAAATCCG ACAGGCCGTC GCTGATCGCC
TGCAAGACCA TCATCGGTTA CGGCGCTCCC ACCAGGGCCG GCACGTCCAA GGCGCACGGC
GAAGCGCTTG GCGCGGAAGA ACTCGCGGGG ACGAAAAAAG CGCTGGACTG GGAGTATGGT
CCCTTTGAAG TTCCCGACGA TGTCCTCAAC GCCTGGCGCA GCGCCGGACG CAAGGGCAAG
CGGCACAACA AGGAGTGGCG CGCGCGGCTC GCAGCCCAGC CGGATGCTCA GCGAGACGAA
TTCAAGCGTC GCGTCATCGA ACGCAAGCCA TCTCAAAACC TCAATGAGGC GATCCGCAAG
CTCAAGGACA AGCTGGTCGC CGAACCGCCG ACGGTCGCCA CCCGCAAAGC CAGCGAAATG
GCGCTCGAGG CGCTGGTGCC GGCGGTGCCG GAACTGCTGC TCGGTTCCGC CGATCTCACC
CCTTCGAACA ACACCCGCAC CAAGGGCCTG AAAGAAGTGG AGCCCGGCCA ATATGGCGGC
CGCTACATCC ACTACGGTAT CCGCGAACTC GGCATGGCCG CCGCCATGAA CGGCATCGCC
CTGCACGGCG GATATGCGCC GGCCGGCGGC ACCTTCATGT GTTTCGCCGA CTATGCCCGC
CCGGCGATGC GCGTTTCGGC GCTGGCGTAT ATTCCCACAA TCTACATCAT GACCCACGAC
TCGATCGGGC TCGGCGAGGA CGGTCCCACC CATCAGCCGG TGGAACATCT GGCAAGCTTA
CGCGCGATGC CCAACATGCG GGTGTTCCGC CCCGCCGATG CGGTCGAGAC CGCCGAATGC
TGGCAACTCG CTCTTGAGCG GCCGAAGGGA CCGACGGTTC TGGCCCTGTC GCGCCAGAAC
CTCGCGCCGG TGCGCAAGAC CGCGGACACG GACAATCGCT GCGCGCATGG CGCCTATGAA
CTGGTCGCAC CCAACGGCGA GGCGAAGGTG TCGATCTTCG CGTCGGGATC CGAAGTCGAG
ATCGCCGTTG CCGCGCAGCA GCAACTCTCC CAGCGCGGCA TCGCCTCGCG CGTTGTTTCG
GTGCCCTCCC TGGAACTGTT GCTAGAGCAG CCCGAGGATC GCCGGCAGGC CATTATCGGC
AAGGCTCCCG TCAAGATCGC CGTGGAAGCC GCCGTGCGCT TCGGATGGGA CGCCGTCATC
GGGGCGGACG GCCTTTTCGT CGGCATGAAC AGTTTCGGCC ACAGCGCTCC CGCCAAGGAC
CTCTACAAGC ATTTCGGCAT CACCGCCGAA GCCGTGGTCA GCGCAGTCGA AAAACGCCTT
GGCTGA
 
Protein sequence
MPTVDSSRMA NAIRALAMDG VEKAKSGHPG LPMGTADIAT VLFTKFLKYD AADPHWPDRD 
RFILSAGHGS MLLYALLYLT GYKQMTLDQL KNFRQLDSKT PGHPENFITE GAETTTGPLG
QGVATSVGFA LAERLLAAEF GGEVVDHYTY VLCSDGDLME GISHEAIALA GHLKLNKLIF
LYDDNGITID GPISLADDVD QVARFKACGW DARRIDGHDQ KAIAAAIRRA QKSDRPSLIA
CKTIIGYGAP TRAGTSKAHG EALGAEELAG TKKALDWEYG PFEVPDDVLN AWRSAGRKGK
RHNKEWRARL AAQPDAQRDE FKRRVIERKP SQNLNEAIRK LKDKLVAEPP TVATRKASEM
ALEALVPAVP ELLLGSADLT PSNNTRTKGL KEVEPGQYGG RYIHYGIREL GMAAAMNGIA
LHGGYAPAGG TFMCFADYAR PAMRVSALAY IPTIYIMTHD SIGLGEDGPT HQPVEHLASL
RAMPNMRVFR PADAVETAEC WQLALERPKG PTVLALSRQN LAPVRKTADT DNRCAHGAYE
LVAPNGEAKV SIFASGSEVE IAVAAQQQLS QRGIASRVVS VPSLELLLEQ PEDRRQAIIG
KAPVKIAVEA AVRFGWDAVI GADGLFVGMN SFGHSAPAKD LYKHFGITAE AVVSAVEKRL
G