Gene Nwi_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2583 
Symbol 
ID3675617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand- 
Start bp2807424 
End bp2808104 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID637714149 
ProductTetR family transcriptional regulator 
Protein accessionYP_319188 
Protein GI75676767 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.176518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTATC GGCGGACCCA GCAGGTGATG AAGCGCCTCG CGGCGCGCCG CCGCGCCATT 
CTGACGGCCG CGCGGGATAT AGCCGGCAAC GCGGGCATGG CGGCGGTGCA GATCGCGCCG 
GTCGCGCTTC GTGCCGAGGT CGCCGCCGGT ACGGTCTATC GTTACTTTCC TTCCAAAGCC 
GATCTGATTT CCGAACTGAT CGCGGAGGTC GTGCGGGATG AGCTGACGGC CATACGCGGC 
GCTGCTGACG CCGCGCCCGG TCCATCCTCG GCGCTTGCGG CCGCCATCGC CACCGTCGCC 
GTGCATATGG TCTCTCACCG CAAATTGGCG TGGGGCATTC TGGCTGAACC GGTCGACGTG 
GATGTGGCGG CGAGCCGGCT GGCAAGCCGC CGCGACATCG TCGGTGAGAT TGAAACGCGC 
ATCAAAGCTG CCGTCAGCGC TGGACATCTG CCGCAGCAGG ATACGTCGCT CGCCGCGACC 
GCGCTGCTTG GCGCGCTGCA TGAAGCGCTG GTGGGTCCGC TCGCGCCCGA CTTCGAGGAT 
CAGGCGTCGC TGCGCGATGT GGTGAAGGCC GCCACCCTGC TGGCGTTGCG TGCGGTCGGC 
GTGACGGATG CGCGCGCTCG CGGTCTTGTG GTCCAGGCGG CCCTGCCGGC AACGACGCCG 
GCAGGGAATA AAACGGACTG A
 
Protein sequence
MVYRRTQQVM KRLAARRRAI LTAARDIAGN AGMAAVQIAP VALRAEVAAG TVYRYFPSKA 
DLISELIAEV VRDELTAIRG AADAAPGPSS ALAAAIATVA VHMVSHRKLA WGILAEPVDV 
DVAASRLASR RDIVGEIETR IKAAVSAGHL PQQDTSLAAT ALLGALHEAL VGPLAPDFED 
QASLRDVVKA ATLLALRAVG VTDARARGLV VQAALPATTP AGNKTD