Gene Nwi_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2310 
Symbol 
ID3675934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2527984 
End bp2529099 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID637713873 
Productshort chain dehydrogenase 
Protein accessionYP_318916 
Protein GI75676495 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.604961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.538846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCTCA CGGTTGGAAC CTCTGCAATC CAAGGCGGTG TGATGTTCGC GATCGAGCAG 
GTCTTCCGAA AGCCCATTCC TGAAAGCCTT CAAGGCAAGG TGGTGATGAT CACGGGCGGT
TCGGCCGGGG TGGGCCGGGC AGCCGCGCGG GCTTTCGCGC GCGAGGGCGC GAATGTCGCC
TTGCTCGCGC GCGACGTCGC GGGACTCGAG GATGCGAAAG CGGAGATCGA ATCCTTCGGC
GGTGAAGCAA GGATTTTTCC GGCTGATGTC GCCGATGCGG AAGCCGTGTT CGCAGCGGCG
GCCCAATGCG AAGTCGAGCT TGGGCCGATC GACATCTGGG TCAACAATGC GATGGCGACC
GTCTTTTCGC CGGTCGAGCA GTTGACGCCG GAGGAGATCA GGCGTGTGAC GGAAGTGACC
TATCTCGGTT ATGTGCACGG CACGCTTGCA GCGCTTCGCC ATATGCGGCC GCGCGATCGG
GGCGTGATCG TGCAGGTCGG GTCGTCGCTG GCTTATCGCG GCATTCCCCT GCAAGCCGCT
TACTGCGGAG CCAAGCACGC GGTGCGTGGT TTCACGGACT CGCTGAGAAC GGAACTGCTT
CATCATCGCA GCAACGTTGC CGTCACCGCG GTCCATCTTC CGGCCGTCAA CACGCCGCAG
TTCGAATGGG CGCGCACAAG GATGCGCAAG GCATTCCGTC CGGTGGCGCC GGTCTATACA
TCGCGGGCGG CGGCGTTAGC CATCGTCCAT GCCGCGACAC ATCCGAAACG GGAATACTGG
CTGGGCGGAA CGACATCGCT CACGATCATC GGCGATATGC TGTTTCCCGG CCTGCTTGAT
CGTTTTCTCG CGCGTGAGGC GGTGGATGGA CAACAGAAGG AAACCGAGAT CGGCGCTAAC
CGATCCGACA ACCTCTTCTT GCCTGTCTCC GGGCGACATC GCACCAACGG CGCCTTCAGC
GCGGAGGCAC GGCCGGATCC CGCAATGCTC TCCGCACAGA CGATCCGCTT CGCGACGATT
GCGGGAGCCT GTGTCCTGAT CGGCTTCGCC GGCGCGGTGC TCGGCGCGAG GCGCGCCTCG
GCGGCACGGA CCGAAAAGCG ATGCCGCCCG CGATAA
 
Protein sequence
MILTVGTSAI QGGVMFAIEQ VFRKPIPESL QGKVVMITGG SAGVGRAAAR AFAREGANVA 
LLARDVAGLE DAKAEIESFG GEARIFPADV ADAEAVFAAA AQCEVELGPI DIWVNNAMAT
VFSPVEQLTP EEIRRVTEVT YLGYVHGTLA ALRHMRPRDR GVIVQVGSSL AYRGIPLQAA
YCGAKHAVRG FTDSLRTELL HHRSNVAVTA VHLPAVNTPQ FEWARTRMRK AFRPVAPVYT
SRAAALAIVH AATHPKREYW LGGTTSLTII GDMLFPGLLD RFLAREAVDG QQKETEIGAN
RSDNLFLPVS GRHRTNGAFS AEARPDPAML SAQTIRFATI AGACVLIGFA GAVLGARRAS
AARTEKRCRP R