| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2272 |
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| Symbol | |
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| ID | 3675177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2476915 |
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| End bp | 2477793 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637713835 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_318878 |
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| Protein GI | 75676457 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.267768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.247445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCG CGAACCAGCT ACGATCCGGA AAGACCCATC GCGACGAGAA TTTTCCCGTC
GCGTCGCGTC TCATTCACCC GCGTCATCGC GCGTTGATTC TCGCATTCTA TAATTTCGTC
CGGACGGCGG ACGACATCGC CGATCACGCC GAACTCGGTG AAAAGGACAA GCTTGCCTGG
CTCGACCTGT TTGAGAGCGA ACTCCTGGGA CAGGGAGACA GCCAGCCCGA AGCCGTCAAC
CTTCGCAAGG CGCTGGCGCA ACGGTCGATG CCGCCGCGCC ACGCCATCGA TGTGCTGAAG
GCGTTCCGGA TGGACGTCAC CAAGCTGCGC TACGAGACCT GGGACGACGT GATCGATTAT
TGCCGCTACT CGGCGATGCC GGTCGGGCGT TTCATGCTCG ACGTGCATGG CGAGAGCATG
TCGACCTGGA CCGCGTCGGA CGCCCTGTGC GCCGGCCTGC AGATCAACAA CCATCTTCAG
GATTGCGCCA AGGATTACAG GAATCTCAAC CGCGTTTATC TGCCGCGCGA TGCGCTTGCC
GCCTCGGGCG TCTCGGTGGA AATGCTCGGG GAGGACAAAT CCTCGCCGGC GCTCCTGCAA
TGCCTGCACG CGCTCGCCGG ACGGACCGAA GTTTTGCTCG ACGAGGGCCG GCCGCTCGCG
GGCGAGATCA GGGATACGAG GCTGGGACTT GAAGTCGGCG TGATTCAGAT GTTCGCCGAC
AAGATCGTCG CCTTGCTGAA AGCGCGCGAT CCTCTGAGCG AGACGGTTCA TCTCAAGCCG
CTGCAACTGC TCGGTTACAG CGCCGCCGGC ATCACCATGG AAATGCTTCG CCGCTTGCTG
CGGCGACGGC CGGTGTCGAA CCCTGCGGCC GGCGCATGA
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| Protein sequence | MPAANQLRSG KTHRDENFPV ASRLIHPRHR ALILAFYNFV RTADDIADHA ELGEKDKLAW
LDLFESELLG QGDSQPEAVN LRKALAQRSM PPRHAIDVLK AFRMDVTKLR YETWDDVIDY
CRYSAMPVGR FMLDVHGESM STWTASDALC AGLQINNHLQ DCAKDYRNLN RVYLPRDALA
ASGVSVEMLG EDKSSPALLQ CLHALAGRTE VLLDEGRPLA GEIRDTRLGL EVGVIQMFAD
KIVALLKARD PLSETVHLKP LQLLGYSAAG ITMEMLRRLL RRRPVSNPAA GA
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