Gene Nwi_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2097 
Symbol 
ID3674654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2294582 
End bp2295052 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID637713662 
Producttype IV secretion system protein VirB4 
Protein accessionYP_318706 
Protein GI75676285 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3451] Type IV secretory pathway, VirB4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTCTT CGCAGTCGCT GGCCGACATC GAAGCCTCAC CGATCGCGCC GGTTCTGGTC 
GAGAGCTGCC CGACACGCAT CTTCCTCGCC AACGAACGCG CGATCGAACC CCAGATCACA
GCCGTCTATG AGCGGTTCGG GCTCAATGCC CGCCAGATCG AGATCATCGC GCGGGCGACT
CTGAAGCGCG ATTACTACTG TCAGTCGCGG CGCGGCAACC GGCTCTTCGA GCTTGGCCTT
GGATCGGTCG CGCTGGCGCT GTGCGCATCA TCCGACAAGG CCGCGCACGC GCTGATCGAC
GAACTGCTCC GCGATGGCGC CCGGCCGTAT TTCCTCGAAG CCTGGCTCTA CGCCAACGAC
CTCGCCTGGG CCGGCGACCT CGTTCCCAAC CTCACCAATG TCATCGACTC GTCCGCAACG
GCGGACCGGC CGGTTTCCAT CGACCCCAAA GAACAGGAGA CACCCTCATG A
 
Protein sequence
MFSSQSLADI EASPIAPVLV ESCPTRIFLA NERAIEPQIT AVYERFGLNA RQIEIIARAT 
LKRDYYCQSR RGNRLFELGL GSVALALCAS SDKAAHALID ELLRDGARPY FLEAWLYAND
LAWAGDLVPN LTNVIDSSAT ADRPVSIDPK EQETPS