| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1830 |
|---|
| Symbol | |
|---|
| ID | 3675872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2002899 |
|---|
| End bp | 2004095 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637713391 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_318442 |
|---|
| Protein GI | 75676021 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.121743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.457786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGG CTGACCCGGC AGCGGCCGGG AAGCCTAAAT TGCCGCCGCT CCTGAACATC
ATCGCGCTGG CGACCTTCGC GGCGAGCCTA TCGACGCGCG CGATGGACCC GGTGCTTCCG
CATGTCGCCG AGGATCTGTC GGTGACGGTC GCGACCGCCG CCGGCCTGTC CGCGGTCACC
GCCTTCTCGT TCGCCATCGT GCAGCCGCTG ATCGGCGCGG CCGCCGATAT CTTCGGCAAG
GGGCGGCTGA TGCTGGTGTG CCTGGTGCTG CTCGGCATCT CGAACGTCGC CGGCGCGCTG
TGCACATCCT ATGCCGCGCT GTTCGTCACG CGAATCTTCG CCGGGATCGC ATCCGGCGGT
GTTTTTCCAG TTGCGCTCGG CATGGCGAGC GACCTGGTGC CGGTGCCGCA GCGACAGGTG
GCGATCGGCC GGACCATCGC GGGTACGATG GGAGGCAACC TGCTGGGCGC CTCTTTCGCC
GGCGTGATCG GTGATCTCGT CGGCTGGCGA GGCGTGCTCG TTGTGCTCGG TGCGCTGGTT
CTCGCGGTGT CGATCGCGGT CGGACTCGGA TTTCAACGCG GCGACGCGAT CGCGACCTCG
CGACGGATGA AGTTGACCGA TCTGCGGCAG GGCTATCGGC AGATCTTCAG CAATTCGAAC
GCCAGGGTCT GTTATTCGGC CGTTTTTATC GAAGGCTGCT GCGTGCTCGG GCTGTTTCCC
TACGTCGCGG CGTTCCTGTT CGAACTCGGT GAAACCCGGC TGTCGATCGC GGGCATCGTC
ATCGCCGGCT TTGCCGTCGG CGGCCTGTTC TACACCATGA CGGTGTCACG GTTTCTGGTG
CTGCTCGGCG TTCGCGGCAT GATGATTTCC GGGGCCTTGC TGGTGGCGGC GCAGATCGTG
GCGGTCGGCC TGGGCCCGGA CTGGCGCATC CAGCTTCTCA GCTTCGTTGC GATGGGCTGG
GGGTTCTACA TGCTGCACGG CTGCCTTCAG GTGTTCGCAA GCCAATTGTC CGAGCAGGCG
CGGGCGACCG CGCTGTCGCT GCATTCGTTT TTCTTCTACA TGGGGCAGAC GGCAGGCCCC
GTCGCCTATG GCCTGAGCCT TTCATGGGTC GGAAAATTTC CCACGCTCGC TGTGAATGCC
CTCGTCATCG CGATTCTCGG ATTGGTCTGC GCGCGGCTGC TGGCCGCGAA GGCGTGA
|
|---|
| Protein sequence | MTSADPAAAG KPKLPPLLNI IALATFAASL STRAMDPVLP HVAEDLSVTV ATAAGLSAVT
AFSFAIVQPL IGAAADIFGK GRLMLVCLVL LGISNVAGAL CTSYAALFVT RIFAGIASGG
VFPVALGMAS DLVPVPQRQV AIGRTIAGTM GGNLLGASFA GVIGDLVGWR GVLVVLGALV
LAVSIAVGLG FQRGDAIATS RRMKLTDLRQ GYRQIFSNSN ARVCYSAVFI EGCCVLGLFP
YVAAFLFELG ETRLSIAGIV IAGFAVGGLF YTMTVSRFLV LLGVRGMMIS GALLVAAQIV
AVGLGPDWRI QLLSFVAMGW GFYMLHGCLQ VFASQLSEQA RATALSLHSF FFYMGQTAGP
VAYGLSLSWV GKFPTLAVNA LVIAILGLVC ARLLAAKA
|
|---|
| |