| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1759 |
|---|
| Symbol | |
|---|
| ID | 3675639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1929123 |
|---|
| End bp | 1930931 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637713319 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_318372 |
|---|
| Protein GI | 75675951 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00474122 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0887156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGG CGGGGGCGCA TTGGATCGCG ATGACGGCGG CGGCTCTGGC GCTCGGGGGC
GCGGCGGCGC AGGCTCAGCA GGTCGGCACG GCATCGGCGG TCAATCCCGC CGCCACCGCC
AACCTGAAGA CCATCACCAT CGGCCAGTCG ATCGCCCACA AGGAGCGTAT CCAGACCAGG
TCAAGCGGCT CGGTGCAGTT GCTGTTTCTC GACAAGACGT CGATGACCAT CGGCCCGAAC
AGCGACCTCA CAATCGATGA ATACGTCTAT GACCCCAACG CCAACACCGG CAAACTGGCG
GCCACGCTCG GCAAGGGCGC GCTGCGTTTC GTAGGCGGCC AGATCAGCCA CAGCGGCGAC
GCGGAAATCA AGACCGGAAC GGCCTTGATC GGCATTCGCG GCGGCGTGAT GATGACCGAC
GGCAAGGGCG GCATCTATGC CGGCTACGGC AGAATGACTG TCTCATCCGG CGGCCAGACC
GTCACCCTCG GCGCCGGCGA ATTCACCCAG ACGCAAGCCG GCGGCCCCCC TTCGCCCCCC
GGCCTGCCGC CGCCAGGGTT CGTGCAGCAG TTGATCGCAT CGTTCCAGAG CGCCGCCGGT
CAAACGGGCG GTGCGCGCGC GGGCTCGGCT TCGGCGAAGA ATGTCGCCGC CGCCGAGCAC
AAGGCGACCG GATCACCCGG CGGACTGGTG ACCGGCTCGG GTGCTCCGCC CTCTCCCAAC
CCGCCCACCA TTATCCAGCA GATCAATGCG ATTACGTCAG CCTTCACGGA AGCGATCCAG
ACATCCAATC AGGTGACCGG GGCGCAGCAG ATCGCGCATG ATCATCCGCC CGGCGGCGAC
CACCCTCCCC CGACGAACAA TATCCCGCCT CCGACAAACA ACAATCCGCC CGGGCCGCTG
CGCGGGTATG TCGGCGGATT GGTCTACACA AGCTCAAGTG AGGGCGAATA TTACTCGAGT
CACGGTGAGA ACGGTGAGCA TGGCGTAAGC TACGAAGGCC CGACCAATAT CGATCCCGTC
ACCGGAACCG CCGAAATCAC CCTCGACACC GCCAACAAGC GCGTCCAGGC TCGTCTGGAC
ACCTACCGTT ACGATCAGAA CAACCCGTTC ACGCAACTCA CCGAGACGAT GCACGAGTTG
TTTCAGTTCG GATCCAAGGG ATCGACCGGC CCCGCTGACA GCGTCTATGT AGACAAAGAT
AATTTCTACG CGAACACGCC CGAGAACCAC GAGGTCAACG GCAAGAAGGT CAGCGGCATT
CTGGTTTCCG GCAACGGCAT CGCGACACAC GAGGTCGTTG CCGATGCAAT TCCGAACCTG
ACACCGTGCC AGTGTGACTA CACACGCTGG GGTTTCTGGA TGGCTGATGA AAGCGATACC
AGCACCAGTG CGCCTACATC ATATAAGACA ACCGTCGGCA CCTGGGTCGC CGGTCGGCCC
GTGGGCAGTA TCGGCGACGT GCCGACGACA GGCGCCGCAA CCTACACCGG CCATGTCGTC
GCCAATGTGA ATAATGCAGG ATTCGTCGCC GGCGGGTTCT CGAACACCGT CAATTTCGGG
GCGCGCACTG GCGCGGTGAG CGTGACCAAT CTCGACGGCA CGAACTATTC CGGCACCGTG
AACTTCAACA CCGACCCGCG CAATTTCGGC GGCACGCTCA ACGGCGATAC CGGCAGCCGT
CAGATGGCCA TCGACGGCAG CTTTTTCCAG GGCGTGAATA ACCCAGTCGG CGAGATGGGC
GGACGGGTCG GAATCTCCGG CGCCGACGGC TATCTCGGCA GCGGCATTTT CGCGGCTACC
AAACAGTGA
|
|---|
| Protein sequence | MTRAGAHWIA MTAAALALGG AAAQAQQVGT ASAVNPAATA NLKTITIGQS IAHKERIQTR
SSGSVQLLFL DKTSMTIGPN SDLTIDEYVY DPNANTGKLA ATLGKGALRF VGGQISHSGD
AEIKTGTALI GIRGGVMMTD GKGGIYAGYG RMTVSSGGQT VTLGAGEFTQ TQAGGPPSPP
GLPPPGFVQQ LIASFQSAAG QTGGARAGSA SAKNVAAAEH KATGSPGGLV TGSGAPPSPN
PPTIIQQINA ITSAFTEAIQ TSNQVTGAQQ IAHDHPPGGD HPPPTNNIPP PTNNNPPGPL
RGYVGGLVYT SSSEGEYYSS HGENGEHGVS YEGPTNIDPV TGTAEITLDT ANKRVQARLD
TYRYDQNNPF TQLTETMHEL FQFGSKGSTG PADSVYVDKD NFYANTPENH EVNGKKVSGI
LVSGNGIATH EVVADAIPNL TPCQCDYTRW GFWMADESDT STSAPTSYKT TVGTWVAGRP
VGSIGDVPTT GAATYTGHVV ANVNNAGFVA GGFSNTVNFG ARTGAVSVTN LDGTNYSGTV
NFNTDPRNFG GTLNGDTGSR QMAIDGSFFQ GVNNPVGEMG GRVGISGADG YLGSGIFAAT
KQ
|
|---|
| |