| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1749 |
|---|
| Symbol | |
|---|
| ID | 3676472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1918562 |
|---|
| End bp | 1919995 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637713309 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_318362 |
|---|
| Protein GI | 75675941 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0882405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.165401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCGA AGGCATTGAC TAACGAAGAT ATGACCCGGC GGCCCGTCAC TCCCCTACGT
CGTTCTGTCT CGAAGCTGAT GACGCTGGTC ACCGCCTGCG CGATCGCGAA CGCCTCCTTT
CCAGCCCAAG CGCAACAGGA CAAAGGTCTG CCGATGTTGC GCGATAGCGA GACCGAGCAA
CTGCTGCGAG ACTATACGCG GCCGATCCTG CGCGCGGCGG GGCTGCAAAA GCACAACATT
CAGATGGTCA TCATCAACGA CAGGTCCTTC AACGCCTTCG TCGCCGATGG CCGCCGCATC
TTCGTGAACT ACGGGGCGAT TTCAAAGTCG ACGACGCCGA ACCAGTTGAT CGGCGTGCTC
GCGCATGAGA CCGGGCATCT CGCCGGTGGC CATCTGTCCA AGTTTCGCGA GCAGCTCGCC
CGAACCCAGA CCCAGCTCAT CATCGCCATG CTTCTCGGCG CCGGCGCTCT CGCGGCCGGA
GCCGGCCGCG GCGGAAGCAA CAGCCCCGGC AGCAATATCG GCGCGGCCGC GCTCAGCGCG
CCTCAGGAAA TCGCCCGCCG AAGCCTGTTG GGCTATCAGC GCCAGCAGGA GGAAAACGCC
GACCGCGCCG CCGTCAAGTT CCTCAACGCC ACCGGCCAAT CCCCCCGGGG CATGTACGAG
ACCTTCAAGC GCTTCACCGA CGAAAGCCTG TTCGCCGCGC GCGGCGCCGA TCCCTATGCG
CAGTCGCACC CGATGCCGGC CGACCGTGTC GCCGCGCTCG CGGAACTCGT CAAGACCAGC
CCCAACTGGC AAAAGAAGGA CGATCCGGCC CTGCAGATGC GCCATGACAT GGTGCGTGCC
AAGATCTCGG CGTTCATGGA ACGTGAGGAT ACGGTATACC GGCGCTATCC GCGGTCAGAC
ACCAGCCTGC CCGCCCGCTA CGCGCATGCC ATCACCACCT ACCTGCATGG CGATCTTCGC
TCGGCCATCG AGCAAATCGA TGCGCTAATC AAGCTTCAGC CGCAGAACCC TTACTTCTAC
GAAGTACGTG GGCAGGCTTT GCTCGAGGGA GGCCGCCCCA CGGAGGCGAT CGCACCGCTG
CGGCGCGCCG TCCAGCTCTC GCGAAACGCT CCGCTCATCG AGATGCTGCT GGGTCAGGCG
CTCGTGGCCT CGAACAACAA GGCCAATGCC GACGAGGCTA TCGCAATCCT GCGAACGGCG
CTGGTACGGG AGCCAGAGGC TCCGCTCGGC TATTCGCAGC TTGCGATAGC CTACGGCCGC
AAGGGCGATT ATGCACAAGC CGATCTGGCA TCGGCTCAGG CCGCGTTCCT GCGAGGCGAC
AACAAGACGG CGCGCGAACT CGCATCACGC GCGAAAACCC GCTTCGCGAT CGGCACGCCC
GGATGGGTCA AGGCGGACGA TATCGTCTCA TCCAAGATTC CGGACAAGAA ATAA
|
|---|
| Protein sequence | MIPKALTNED MTRRPVTPLR RSVSKLMTLV TACAIANASF PAQAQQDKGL PMLRDSETEQ
LLRDYTRPIL RAAGLQKHNI QMVIINDRSF NAFVADGRRI FVNYGAISKS TTPNQLIGVL
AHETGHLAGG HLSKFREQLA RTQTQLIIAM LLGAGALAAG AGRGGSNSPG SNIGAAALSA
PQEIARRSLL GYQRQQEENA DRAAVKFLNA TGQSPRGMYE TFKRFTDESL FAARGADPYA
QSHPMPADRV AALAELVKTS PNWQKKDDPA LQMRHDMVRA KISAFMERED TVYRRYPRSD
TSLPARYAHA ITTYLHGDLR SAIEQIDALI KLQPQNPYFY EVRGQALLEG GRPTEAIAPL
RRAVQLSRNA PLIEMLLGQA LVASNNKANA DEAIAILRTA LVREPEAPLG YSQLAIAYGR
KGDYAQADLA SAQAAFLRGD NKTARELASR AKTRFAIGTP GWVKADDIVS SKIPDKK
|
|---|
| |