Gene Nwi_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1543 
Symbol 
ID3676371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1688930 
End bp1689775 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID637713098 
Productpeptidase S14, ClpP 
Protein accessionYP_318156 
Protein GI75675735 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTC GCAAGCTGCC TGAGGCGCGG ACGTTTCAGC GCCCGCAGAA TTTTCAATGG 
GACGCGCCCA GCGACGTTCT CGCTCGCTGG TCCGAGACTC CGCGTGCCGC CGCGTCCGAC
GACGATGCCA CCATCAGCAT GTACGAGGTG ATCGGCGAGG ATTGGTGGTC GGGCGGCGGT
GTGACGGCCA AGCGCATTTC CGCAGCGCTG CGCTCGATCG GAGACCGCGA CGTTACCGTC
AAGATCAACT CGCCCGGCGG CGACATGTTC GAAGGCATCG CGATCTACAA TCTGTTGCGC
GGCCATCCTG CGAGGGTGAC GGTCGAGGTG CTGGGCTGGG CGGCGTCCGC CGCCTCAATC
ATCGCCATGG CCGGCGATGA GATTCGCATG GGTCTCGGCA CCTTCATGAT GGTGCATAAC
GCCTGGGGCG TCGTTATCGG CAATCGTCAC GACATGCGCG AATCGGCCGA GCTGTTTGAC
GGGTTCGACA GCGCCATTGT GGATATCTAC GAAGCGCGCA CCGGCCTGAA GCGCTCCGCG
ATCGAAAAGC TGATGGACGC CGAAACCTTC ATGGGGCCGT CCGAGGCTGT CAAGAATGGC
TTTGCTGACC TGGTCGATGA CGCCATCGGC GCCGACCAGT CGGAAGCCGA GAACTCTGTC
GCTGGCGCGG TGAACGCCCG GCGGCGCATG GATGCTGCTC TTGCGAAACA GGGCGTCCCG
CGTGTCGAGC GGCGGCGCAT GTTCGCAGAG CTCGCAGGGG GCACGCATGA CGCTGCCCCG
ACAGCTACGC ATGACGCTGG CTTAGTCGCT GCCGCCCGGC AGTTCATCAA CGCAATCCGG
TCATAG
 
Protein sequence
MSLRKLPEAR TFQRPQNFQW DAPSDVLARW SETPRAAASD DDATISMYEV IGEDWWSGGG 
VTAKRISAAL RSIGDRDVTV KINSPGGDMF EGIAIYNLLR GHPARVTVEV LGWAASAASI
IAMAGDEIRM GLGTFMMVHN AWGVVIGNRH DMRESAELFD GFDSAIVDIY EARTGLKRSA
IEKLMDAETF MGPSEAVKNG FADLVDDAIG ADQSEAENSV AGAVNARRRM DAALAKQGVP
RVERRRMFAE LAGGTHDAAP TATHDAGLVA AARQFINAIR S