Gene Nwi_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1178 
Symbol 
ID3675813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand+ 
Start bp1282984 
End bp1283625 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID637712728 
Producthypothetical protein 
Protein accessionYP_317792 
Protein GI75675371 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCT TCCATGAAGT GCTGTTTCCG CTCGATGTCG CGCTGAAGAG CGCGGGCGGG 
CCGGAGCGGC GCACCGACAT CGTGAGTTTC GGCTCGGGCC GCGAGGCGCG CAACGCGCGC 
TGGGCGCAGT CGCGGCGACG CTTCGACGCC GGTTACGGCG TCAAGACGCT GGAGGCGTTG 
CAGGCCGTTG TCGCCTTCTT CGAGGAGCGG CGCGGCAGGC TCTACGGCTT TCGCTGGCGC 
GACCGGCTGG ATAGCTGTTC CGCTGCGACC GGCAGCGTTA TCTCGCCGCT CGATCAGGTG 
ATCGGGATAG GAGACGGAAC GGCATCGACG TTTCAGTTGA TCAAGACATA TGGCGACGCT 
TTCGCGCCTT ATGCGCGCGC GATCGGAAAG CCCGTGAACG ATAGCGTGCG CGTCGCGGTC 
GCCGAGAGCG AGGTATCGGC GGGATCGGCC TTCACCTGCG ACGCCACCAC CGGCGTCGTG 
ACGTTTCTCC CCGAGCATAC GCCGCCGCCG GGAGCGGTTG TCACCGCCGG ATTCAAGTTC 
GACGTGCCGG TGCGGTTCGA CACCGACTAT CTCGAAGTCG ATCTCTCGAC CTTCGCCGCC 
GGCGCTATTC CGAAAATTCC GCTGGTGGAG ATACTGCCGT GA
 
Protein sequence
MTSFHEVLFP LDVALKSAGG PERRTDIVSF GSGREARNAR WAQSRRRFDA GYGVKTLEAL 
QAVVAFFEER RGRLYGFRWR DRLDSCSAAT GSVISPLDQV IGIGDGTAST FQLIKTYGDA 
FAPYARAIGK PVNDSVRVAV AESEVSAGSA FTCDATTGVV TFLPEHTPPP GAVVTAGFKF 
DVPVRFDTDY LEVDLSTFAA GAIPKIPLVE ILP