| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0964 |
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| Symbol | |
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| ID | 3674981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1059788 |
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| End bp | 1061308 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637712513 |
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| Product | TPR and WD-40 repeat-containing protein |
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| Protein accession | YP_317578 |
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| Protein GI | 75675157 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.907164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCG ACCTCATAGA GGATATGGAT ACTTTCAGCC GGTTGAGAGA GAACTGGGAC
GAGGTCTATG ATTCCGATCC CTATGCAACG CTGTTCCTGT CCTGGACCTG GCTCCTTTCC
TGGCTGGAAA AGCTTTCCAC GCCATGGATC GTTCTCGCGG CCAAAAGAAG CGGATCAGAT
GCTCACTATG TCGCGTTCTT TCCACTTCGG ATCGACACCA GGATCGATGG AGAGGGGCGT
CTTTCCAACG ATCTTCGAAT GGCCGGTAGC CACGCCGCAG ACTATTGCGG GTTGATCTCG
ATTCCCGATT TCGAATCAGA CGCGATCACC GCGTTCGCCC AACAGATCAA GCGCTTGAAC
TGGACCGACT TTGTTCTCGG AAACTTTAGT GGATCTGACG CCAGGTTCAC AAAGCTCGTA
TCATGCTTTT CCCAATCAAA GTTCACCATC AGCCAGATGG ATCGCGTCAA CAAGACAGAT
CAGGTTGACA ATGCGTTATG TCCGTATGTG GAACTGCCGG ACGACTGGGA TACGTATCTT
GAAACCCTCA GCGCCAATAC GCGGCAGAAG CTGCGCCGCC TGCTGCGCGT GGTCGATGCC
AATAGCGATT ACCGCATCAC TCACGCGACC GCCGATACGG TGGCGACGGA TCTGGATACG
CTTCTGCGTT TCTGGGAGAT CAAATGGCGG CCCAGAAAGG GAAAGCTTAC AGACAGCCTC
GTTCGCGCGC ATCGCGCCAT GCTTTCTCGC AGCTTCGATC GCGGCTTGCT TTTTCTGCCG
ACGCTCTGGG CGGGCGACCG TCCCCTTGCC GCTCTGGCCA TCCTGGTGGA TGAACGGAAG
AAGTCATTCC TGTTTTATAT CACGGGACGG GACGAGGAAT TCGCGGGTCC TCAGCCCGGG
CTTATCCTGC ACGGCCACAG TATTCGCTAC GCCATCTCAT GCGGGATGAA GCGTTATGAT
TTTCTGCGAG GAAACGAGCG TTACAAGTAC TCATTCGGCG TCAATGAGCG TCGGCTTCAT
TGCTACGTTG TCGCGACGCG AAGCGGTCGC AATCTGGGTG GACGACTTGA CGTACGGGCG
ATCGCAGACG CCTTGAAGGA AGCGACGGAT CTGCATCAGG AAGGGAAGAT CGATCAGGCG
GCGCGGGCCT ATCGTCAGAT ACTCGAAACG GATCCGCGAA ATGAAGGGGC GCTCCATCGC
TACGGTCAGC TTCTTGCCAG AAGAGGCGAT CACGTTGCTG CAAAACGCAT GTTCAAGCTG
CTCACCCGAA TGAGAACCGA CACCTACAAG CCATGGCTTC TGCTCGGGCA ATCCTGCGAA
GCCATGGGCC AGTTTCTCGA AGCGGCGAAC GCTTATCGCG AGGTGATCCG GTTGCAGCCG
GCCGTGCCGG ACATTTTCAG CAAGCTCGTC AACGTTCTTT TCAAGGCCGG CCGCATTGAG
GATGCGAGGC AGGCACTCAT GACCAGCTAT GGAGTCGGAT CGACGGGTGC GGAAGGTGGT
GCATCGTTCA GCATTCACTG A
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| Protein sequence | MHIDLIEDMD TFSRLRENWD EVYDSDPYAT LFLSWTWLLS WLEKLSTPWI VLAAKRSGSD
AHYVAFFPLR IDTRIDGEGR LSNDLRMAGS HAADYCGLIS IPDFESDAIT AFAQQIKRLN
WTDFVLGNFS GSDARFTKLV SCFSQSKFTI SQMDRVNKTD QVDNALCPYV ELPDDWDTYL
ETLSANTRQK LRRLLRVVDA NSDYRITHAT ADTVATDLDT LLRFWEIKWR PRKGKLTDSL
VRAHRAMLSR SFDRGLLFLP TLWAGDRPLA ALAILVDERK KSFLFYITGR DEEFAGPQPG
LILHGHSIRY AISCGMKRYD FLRGNERYKY SFGVNERRLH CYVVATRSGR NLGGRLDVRA
IADALKEATD LHQEGKIDQA ARAYRQILET DPRNEGALHR YGQLLARRGD HVAAKRMFKL
LTRMRTDTYK PWLLLGQSCE AMGQFLEAAN AYREVIRLQP AVPDIFSKLV NVLFKAGRIE
DARQALMTSY GVGSTGAEGG ASFSIH
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